|
Name : kpsC (i14_3372) Accession : YP_006155450.1 Strain : Escherichia coli clone D i14 Genome accession: NC_017652 Putative virulence/resistance : Virulence Product : KpsC protein Function : - COG functional category : - COG ID : - EC number : - Position : 3374174 - 3376201 bp Length : 2028 bp Strand : + Note : - DNA sequence : ATGATTGGCATTTACTCGCCTGGCATCTGGCGTATTCCGCATCTGGAGAAATTTCTGGCGCAACCGTGCCAGAAACTTTC TCTGCTGCGCCCTGTTCCACAAGAAGTTGATGCTATCGCCGTGTGGGGACATCGTCCCAGCGCGGCGAAACCAGTCGCCA TCGCCAAAGCAGCGGGAAAACCCGTCATTCGTCTGGAAGATGGATTTGTGCGTTCGCTGGATCTTGGCGTCAATGGCGAG CCGCCGCTTTCTCTGGTGGTGGATGATTGTTGCATTTACTACGATGCCAGCAAGCCTTCAGCACTGGAGAAACTGGTACA AGATAAAGCCGGAAATACAGCTCTGATAAGCCAGGCCAGAGAAGCGATGCACACCATCGTGACCGGGGATTTGTCGAAAT ATAACCTGGCACCTGCGTTTGTGGCTGATGAGTCAGAACGTTCAGACATCGTTCTGGTTGTCGATCAGACATTTAATGAT ATGTCAGTGACGTATGGCAATGCTGGCCCGCATGAGTTTGCTGCCATGCTGGAAGCCGCGATGGCGGAAAATCCTCAAGC CGAAATTTGGGTGAAGGTGCATCCGGATGTCCTGGAAGGAAAGAAAACAGGTTATTTCGCCGCTCTGCGCGCCACGCAAC GAGTACGTTTAATTGCCGAGAATGTCAGCCCGCAGTCGCTGTTGCGACACGTTTCCCGGGTTTACGTCGTGACCTCCCAG TACGGCTTTGAAGCCTTGCTGGCAGGAAAACCGGTGACATGCTTCGGCCAGCCCTGGTATGCAGGCTGGGGCTTAACCGA CGATCGCCATCCGCAGTCCGCTTTGTTATCTGCCCGACGCGGTTCTGCCACGCTGGAGGAACTTTTTGCCGCTGCATACC TGCGTTACTGTCGCTATATCGATCCGCAAACGGGAGAAGTAAGCAATCTATTTACCGTGCTGCAATGGCTGCAATTACAA CGTCGACATCTGCAACAGCGTAATGGTTATTTATGGGCGCCAGGCTTAACGCTGTGGAAGTCAGCGATCCTGAAACCTTT CTTGCAAACGGCAACAAACCGGCTGAGTTTTTCACGTCGCTGTACTGCGGCGAGCGCCTGCGTGGTATGGGGTGTAAAGG GAGAACAGCAATGGCGAGCCGAAGCGCAGCGAAAATCACTGCCGTTATGGCGAATGGAAGATGGTTTTCTACGTTCATCC GGACTTGGCTCTGACCTTTTGCCGCCGCTATCGTTGGTCCTGGATAAACGCGGGATCTACTATGACGCCACGCGCCCCAG CGACCTGGAAGTGCTGCTTAATCACAGCCAGTTAACACTGGCGCAGCAGATGCGAGCTGAAAAATTACGCCAGCGACTGG TTGAAAGCAAACTGAGCAAATACAACCTGGGGGCCGATTTCTCTCTGCCTGCCGAGGCCAAAGATAAAAAAATCATCCTG GTGCCGGGTCAGGTAGAAGACGATGCCTCAATTAAAACAGGCACTGTGTCGATTAAGAGCAACCTTGAGTTATTACGCAC AGTACGCGAGCGCACTCCGCACGCTTACATTATTTATAAACCGCACCCGGATGTACTGGTGGGGAATCGCAAGGGCAATA TTCCGACAGAACTAATTGCTGAACTCGCTGATTATCAGGCACTGGACGCAGATATTATTCAATGCATTCAGCGCGCAGAT GAAGTGCACACCATGACATCATTGTCCGGGTTTGAAGCGTTATTACATGGCAAGCAAGTTCATTGTTACGGCCTGCCCTT CTATGCCGGTTGGGGTTTAACCGTTGATGAACATCACTGCCCGCGTCGCGAGCAAAAATTAACGATAGCAGATTTGATCT ATCAGGCGTTGATTGTTTATCCAACCTATATCCACCCAACACTGCTACAACCTATTACGGTTGAAGAGGCGGCGGAATAT TTGATCCAGACGCCGCGCAAGCCGATGTTTATTACCCGAAAAAAAGCGGGACGAGTAATACGCTATTACCGCAAATTAAT TATGTTCTGCAAGGTCAGATTTGGCTAA Protein sequence : MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGE PPLSLVVDDCCIYYDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFND MSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFAALRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSNLFTVLQWLQLQ RRHLQQRNGYLWAPGLTLWKSAILKPFLQTATNRLSFSRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSS GLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKIIL VPGQVEDDASIKTGTVSIKSNLELLRTVRERTPHAYIIYKPHPDVLVGNRKGNIPTELIAELADYQALDADIIQCIQRAD EVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTVDEHHCPRREQKLTIADLIYQALIVYPTYIHPTLLQPITVEEAAEY LIQTPRKPMFITRKKAGRVIRYYRKLIMFCKVRFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 0.0 | 97 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 0.0 | 97 |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 9e-126 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| kpsC | YP_006155450.1 | KpsC protein | VFG0259 | Protein | 4e-126 | 50 |
| kpsC | YP_006155450.1 | KpsC protein | VFG0692 | Protein | 2e-116 | 47 |
| kpsC | YP_006155450.1 | KpsC protein | VFG0704 | Protein | 5e-104 | 47 |
