Gene Information

Name : i14_3351 (i14_3351)
Accession : YP_006155430.1
Strain : Escherichia coli clone D i14
Genome accession: NC_017652
Putative virulence/resistance : Virulence
Product : antigen 43 precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3356132 - 3359260 bp
Length : 3129 bp
Strand : +
Note : -

DNA sequence :
ATGCTGATGAAACGACATCTGAATACCTGCTACAGGCTGGTATGGAATCACATTACGGGCGCTTTCGTGGTTGCCTCCGA
ACTGGCCCGCGCACGGGGTAAACGTGGCGGTGTGGCGGTGGCACTGTCTCTTGCCGCGGTCACGTCACTCCCGGTGCTGG
CTGCTGACATCGTTGTGCACCCGTGTGAAACAGTGAATGGCGGAACACTGGTAAACCATGACAACCAGTTTGTATCCGGA
ACAGCTGATGGCGTGACTGTCAGTACCGGGCTTGAGCTGGGGCCGGACAGTGACGAAAACACCGGCGGGCAATGGATAAA
AGCGGGTGGCACAGGCAGAAACACCACTGTCACCGCAAATGGTCGTCAGATTGTGCAGGCAGGAGGAACTGCCAGTGATA
CGGTTATTCGTGATGGCGGAGGGCAGAGCCTTAACGGACTGGCGGTGAACACCACGCTGGATAACAGAGGTGAGCAGTGG
GTACACGGGGGAGGGAAAGCTGCCGGTACAATTATTAACCAGGATGGTTACCAGACCATAAAACATGGCGGACTGGCAAC
CGGAACCATCGTCAACACCGGTGCAGAAGGTGGTCCGGAGTCTGAAAATGTGTCCAGCGGTCAGATGGTCGGAGGGACGG
CTGAATCCACCACCATCAATAAAAATGGCCGGCAGGTTATCTGGTCTTCGGGGATGGCACGGGACACCCTCATTTACGCC
GGTGGTGACCAGACGGTACACGGAGAGGCACATAACACCCGACTGGAGGGGGGTAACCAGTATGTACACAACGGTGGCAC
GGCAACAGAGACGCTGATAAACCGTGATGGCTGGCAGGTGATTAAGGAAGGAGGAACTGCCGCGCATACCACCATCAACC
AGAAAGGAAAGCTGCAGGTGAATGCCGGCGGTAAAGCGTCTGATGTCACCCAGAACACGGGCGGTGCACTGGTTACCAGT
ACAGCTGCAACCGTCACCGGCACAAACCGCCTGGGAGCATTCTCCGTTGTGGCGGGTAAGGCTGATAATGTCGTACTGGA
AAATGGCGGACGTCTGGATGTGCTGAGCGGACACACAGCCACTAATACCCGTGTGGATGATGGCGGAACGCTGGATATCC
GCAACGGTGGTGCCGCCACCACCGTATCCATGGGGAATGGCGGTGTACTGCTGGCCGATTCCGGTGCCGCTGTCAGTGGT
ACCCGGAGCGACGGAAAGGCATTCAGTATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCAC
GCTGAACGCCGGTGATACGGCCACGGATACCACGGTAAATGGCGGACTGTTCACCGCCAGGGGCGGCACACTGGCGGGCA
CCACCACGCTGAATAACGGCGCCACACTTACCCTTTCCGGGAAGACGGTGAACAACGATACCCTGACCATCCGTGAAGGC
GATGCACTCCTGCAGGGAGGCGCTCTTACCGGTAACGGCAGCGTGGAAAAATCAGGAAGTGGCACACTCACTGTCAGCAA
CACCACACTCACCCAGAAAGCCGTCAACCTGAATGAAGGCACGCTGACGCTGAACGACAGTACCGTCACCACGGATGTCA
TTGCTCAGCGCGGTACAGCCCTGAAGCTGACCGGCAGCACAGTGCTGAACGGTGCCATTGACCCCACGAATGTCACCCTG
ACATCCGGTGCCACCTGGAATATCCCCGATAACGCCACGGTTCAGTCGGTGGTGGATGACCTCAGCCATGCCGGACAGAT
TCATTTCACCTCCGCCCGCACAGGGAAGTTCGTTCCGACAACTCTGCAGGTGAAAAACCTGAACGGGCAGAATGGCACCA
TCAGCCTGCGTGTACGCCCGGATATGGCGCAGAACAATGCTGACAGACTGGTCATTGACGGTGGCAGGGCAACCGGAAAA
ACCATCCTGAATCTGGTGAACGCCGGCAACAGTGGTACGGGGCTGGCGACCACCGGTAAGGGTATTCAGGTGGTTGAGGC
CATTAACGGTGCCACCACGGAGGAAGGGGCTTTTGTCCAGGGGAATATGTTGCAGGCCGGGGCCTTTAACTACACCCTCA
ACCGGGACAGTGATGAGAGCTGGTATCTGCGCAGTGAAAATGCTTATCGTGCTGAAGTCCCCCTGTATGCCTCCATGCTG
ACACAGGCAATGGACTATGACCGGATTCTGGCAGGCTCCCGCAGCCATCAGACCGGTGTAAACGGTGAAAATAACAGCGT
CCGTCTCAGCATTCAGGGCGGCCATCTCGGTCACGATAACAACGGCGGTATTGTCCGTGGTGCCACGCCGGAAAGCAGCG
GCAGCTATGGCTTCGTCCGTCTGGAGGGTGACCTGCTCAGAACAGAGGTTGCCGGTATGTCACTGACGACAGGAGTGTAT
GGTGCTGCAGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAG
CCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCA
TGAAAGCGTCATCGGACAATAACGACTTCCGCGCCCGGGGCCGGGGCTGGCAGGGCTCACTGGAAACCGGTCTGCCATTC
AGTATCACTGACAACCTGATGCTGGAGCCACAACTGCAGTATACCTGGCAGGGACTTTCCCTGGATGACGGCCAGGATAA
CGCCGGTTATGTGAAGTTCGGGCATGGCAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGA
CCTTTGGTGAAGGCACCTCATCCCGTGACACCCTGCGCGACAGTACAAAACACGGTGTGAGTGAACTGCCTGTGAACTGG
TGGGTACAGCCTTCTGTTATCCGCACCTTCAGCTCCCGGGGAGACATGAGCATGGGTACAGCCGCAGCCGGCAGTAACAT
GACGTTCTCACCGTCCCGGAATGGCACGTCACTGGACCTGCAGGCCGGACTGGAAGCCCGTGTCCGGGAAAATATCACCC
TGGGCGTTCAGGCCGGTTATGCCCACAGTGTCAGCGGCAACAGCGCTGAAGGCTATAACGGTCAGGCCACGCTGAATGTG
ACCTTCTGA

Protein sequence :
MLMKRHLNTCYRLVWNHITGAFVVASELARARGKRGGVAVALSLAAVTSLPVLAADIVVHPCETVNGGTLVNHDNQFVSG
TADGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTANGRQIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQW
VHGGGKAAGTIINQDGYQTIKHGGLATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYA
GGDQTVHGEAHNTRLEGGNQYVHNGGTATETLINRDGWQVIKEGGTAAHTTINQKGKLQVNAGGKASDVTQNTGGALVTS
TAATVTGTNRLGAFSVVAGKADNVVLENGGRLDVLSGHTATNTRVDDGGTLDIRNGGAATTVSMGNGGVLLADSGAAVSG
TRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGATLTLSGKTVNNDTLTIREG
DALLQGGALTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKLTGSTVLNGAIDPTNVTL
TSGATWNIPDNATVQSVVDDLSHAGQIHFTSARTGKFVPTTLQVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGK
TILNLVNAGNSGTGLATTGKGIQVVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSENAYRAEVPLYASML
TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIVRGATPESSGSYGFVRLEGDLLRTEVAGMSLTTGVY
GAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKASSDNNDFRARGRGWQGSLETGLPF
SITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSTKHGVSELPVNW
WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSRNGTSLDLQAGLEARVRENITLGVQAGYAHSVSGNSAEGYNGQATLNV
TF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2991 NP_708765.1 outer membrane fluffing protein Not tested SHI-1 Protein 0.0 97
sap AAK00474.1 Sap Not tested SHI-1 Protein 0.0 96
unnamed CAD66200.1 hypothetical protein Virulence PAI III 536 Protein 0.0 95
aidA ADD91708.1 AidA Not tested PAI-I AL862 Protein 0.0 88
flu CAI43838.1 antigen 43 Not tested LEE Protein 0.0 87
Z1211 NP_286746.1 adhesin Not tested TAI Protein 0.0 60
Z1651 NP_287154.1 adhesin Not tested TAI Protein 0.0 60
unnamed AAL08472.1 putative autotransporter Not tested SRL Protein 0.0 58
unnamed CAE85197.1 antigen43 protein orthologue Not tested PAI V 536 Protein 0.0 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
i14_3351 YP_006155430.1 antigen 43 precursor VFG0655 Protein 0.0 97
i14_3351 YP_006155430.1 antigen 43 precursor VFG1675 Protein 0.0 95
i14_3351 YP_006155430.1 antigen 43 precursor VFG1063 Protein 0.0 58