Gene Information

Name : i14_3294a (i14_3294a)
Accession : YP_006155376.1
Strain : Escherichia coli clone D i14
Genome accession: NC_017652
Putative virulence/resistance : Unknown
Product : insertion element IS2 transposase InsD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3307330 - 3308235 bp
Length : 906 bp
Strand : +
Note : -

DNA sequence :
GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTCGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCA
GTTGCACGTCATTCTCAGACGAGCCGATGACTGGAAGGACGGCCGCCGCAGCCGTCACACGGATGATACGGATGTGCTTC
GCCGTATACACCATGTTATCGGAGAGCTACCCACATATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAAACAGAA
CTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGACCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACC
CGCTGTACCGCCATCGAAACGGGCACATACCGGCAGAGTGGCTGTGAAAGAAAGTAATCAGCGATGGTGCTCTGACGGGT
TTGAGTTCCGCTGTGATAACGGAGAAAAACTGCGGGTCACGTTCGCGCTGGACTGCTGTGACCGTGAGGCACTGCACTGG
GCGGTCACAACGGGTGGCTTCGACAGTGAAACAGTACAGGACGTCATGCTGGGAGCAGTGGAACGCCGCTTTGGCAGCGA
GCTTCCGGCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCGAATGAAACACGTCAGTTCGCCAGGA
TGTTGGGACTTGAACCGAAGAACACGGCAGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATA
AAGCGTGACTACATAAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTA
TAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGTGGGCCAGTGATGGGTTAA
GTGATAACAGGTGTCTGGAAATATAG

Protein sequence :
MDSARALIARGWGVSFVSRCLRVSRAQLHVILRRADDWKDGRRSRHTDDTDVLRRIHHVIGELPTYGYRRVWALLRRQTE
LDGMPAINAKRVYRTMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFRCDNGEKLRVTFALDCCDREALHW
AVTTGGFDSETVQDVMLGAVERRFGSELPASPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI
KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQWASDGLSDNRCLEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 1e-116 96
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 9e-117 96
insD YP_002414033.1 insertion element IS2 transposase InsD Not tested Not named Protein 2e-133 96
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 5e-118 96
S4050 NP_839218.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 8e-134 96
SF3708 NP_709447.1 IS2 transposase TnpB Not tested SHI-2 Protein 8e-134 96
SF3721 NP_709460.1 IS2 transposase TnpB Not tested SHI-2 Protein 8e-134 96
S4061 NP_839230.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 4e-134 96
S3189 NP_838472.2 insertion element IS2 transposase InsD Not tested SHI-1 Protein 8e-133 95
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 2e-115 95
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 4e-120 93
aec49 AAW51732.1 Aec49 Not tested AGI-3 Protein 9e-121 84
unnamed CAC39283.1 hypothetical protein Not tested LPA Protein 1e-83 62
c5197 NP_757045.1 transposase insD Not tested PAI II CFT073 Protein 9e-62 60
insD YP_854263.1 IS2 transposase Not tested PAI I APEC-O1 Protein 1e-65 60
insD AAZ04432.1 IS2 transposase Not tested PAI I APEC-O1 Protein 1e-65 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
i14_3294a YP_006155376.1 insertion element IS2 transposase InsD VFG1732 Protein 7e-134 96
i14_3294a YP_006155376.1 insertion element IS2 transposase InsD VFG0621 Protein 4e-134 96
i14_3294a YP_006155376.1 insertion element IS2 transposase InsD VFG0608 Protein 4e-134 96
i14_3294a YP_006155376.1 insertion element IS2 transposase InsD VFG0649 Protein 8e-116 95