Gene Information

Name : i14_3274 (i14_3274)
Accession : YP_006155359.1
Strain : Escherichia coli clone D i14
Genome accession: NC_017652
Putative virulence/resistance : Virulence
Product : ShiA-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3295110 - 3296183 bp
Length : 1074 bp
Strand : +
Note : -

DNA sequence :
ATGGTCCATCCTTTTTTACAGGTTCAGAATATGACTGGCAAATTACGCTTTGAAGTGAACGATAACCAGGGCTGTTTCAT
ATTTCTGGAAACCTGGTTTGGCTCGTTGCTGGATGAGTTTGAAGAACTGATTGATGCATACGATGCGGATGAAATCAGCG
AAACAAGTTACATCAACAAACTCAGGCGCCTTGCCCGACAGGAGAATGACTTTATTGATGTACACGCTCACTTGGCATAC
GTATTTCTGGAGCAGAATGCCCCGCGTAAGGCGCTGAATGCTGCCCTTAAAGGGCTGGCAATTGGCAATCGTCTTATCCC
TGAAGGTTTCAGTGGCAGAATCATCTGGATACATCCTGACAACCGACCTTTTCTTCGTGCCCTCTATGCGGCAATCCTGG
CAAATGCACATTTACAGCGTCATCAGGATGCCATCATGCTCATTGAAAAAATACTGGATTACAATCCCGAAGATAATCAT
GGTGCACGCTGGCTACTGGGACCGGAACTGTTACGCACTGGCGCTCATGAACAGGCACGCCATATACTGCAGGAACATGC
AGATGAATTTTCACCTTACTGGTATGAACTCGGCCTTCTGCATTTTCTTAATGGGGAACTGGTAAAAGCTGCAACTGCAT
TTCGTCGCGGCTTTGCGGCAAATACTTACATCGCAGAAATACTGTGCGGAAATCTGCATCCATTTCCACTTGCTGTATGG
CATAACTTTTCAGGCGGTCCGGATACTGCCGAAGATTATTATGCCACATACCACCCGTTATGGGGGCAATATCCGGAAGC
ATTGCTGTTTGTAAACTGGCTCTATAATCATTCCTCTGTGCTGCATGAACGGGCAGAAATCATTAAATGCGCCGAAATGC
TGATGCAGGAAGATGATTTCGAAATATGCGAAAGTATTTTAAGACAGCAGGAGAAGTTGCGTGAAAGAATTGATGAGACG
CTTTCTGAGAAAATTGTACAGAAATGCAGAAATATGAATGGTGAATATATCTGGCCCTGGATATTGCCGTTTTCAGCGGC
AGGCATGAAACATACTGGCATACAGTATCAGTAG

Protein sequence :
MVHPFLQVQNMTGKLRFEVNDNQGCFIFLETWFGSLLDEFEELIDAYDADEISETSYINKLRRLARQENDFIDVHAHLAY
VFLEQNAPRKALNAALKGLAIGNRLIPEGFSGRIIWIHPDNRPFLRALYAAILANAHLQRHQDAIMLIEKILDYNPEDNH
GARWLLGPELLRTGAHEQARHILQEHADEFSPYWYELGLLHFLNGELVKAATAFRRGFAANTYIAEILCGNLHPFPLAVW
HNFSGGPDTAEDYYATYHPLWGQYPEALLFVNWLYNHSSVLHERAEIIKCAEMLMQEDDFEICESILRQQEKLRERIDET
LSEKIVQKCRNMNGEYIWPWILPFSAAGMKHTGIQYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3557 NP_755432.1 ShiA-like protein Not tested PAI I CFT073 Protein 2e-160 99
ECUMN_3323 YP_002414005.1 SHI-2 pathogenicity island protein Virulence Not named Protein 2e-166 99
shiA AFX83956.1 ShiA family protein Not tested SE-PAI Protein 5e-155 90
aec34 AAW51717.1 Aec34 Not tested AGI-3 Protein 4e-144 86
shiA AAD44731.1 ShiA Virulence SHI-2 Protein 5e-141 84
shiA NP_839237.1 hypothetical protein Virulence SHI-2 Protein 7e-141 84
shiA NP_709438.1 hypothetical protein Virulence SHI-2 Protein 7e-141 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
i14_3274 YP_006155359.1 ShiA-like protein VFG1694 Protein 1e-160 99
i14_3274 YP_006155359.1 ShiA-like protein VFG0599 Protein 3e-141 84