Gene Information

Name : i14_1117 (i14_1117)
Accession : YP_006153243.1
Strain : Escherichia coli clone D i14
Genome accession: NC_017652
Putative virulence/resistance : Unknown
Product : transposase insF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1141066 - 1142007 bp
Length : 942 bp
Strand : -
Note : -

DNA sequence :
ATGTCCGCCTTAAATGACAACTGGCGGAGCAGGCTGAGGAACTGGCCATCCTCCAAAAGGCCGCGACAACTTCGCGAAGC
GCCTGAAATGAAGTATGTCTTCATCGAAAATCATCGGGCAGAGTTCAGCATCAAAGCGATGTGTCGTGTACTTCGGGTTG
CCCGCAGCGGCTGGTATGTCTGGCTCTGGCGTCGTCACCAGATGAGCCTGCGCCAACAGTTTCGGCTCACCTGCGATGCC
GCTGTCCATAAGGCATTCTTTGAGGCAAAGCAGCGATACGGTGCTCCCCGCCTTGCTGACGAAATGCCGGAGTTCAATAT
TAAAACCATTGCCGCCAGCCTGCGTCGTCAGGGGCTGCGGGCGAAAGCCAGCCGGAAGTTCAGCCCGGTCAGCTACCGTG
CACATGGCCTGCCCGTATTGGAGAATCTGCTGGAGCAGGACTTCAGCGCCAGCGGCCCGAACCAGAAGTGGGCGGGTGAC
ATCACGTACTTGCGTACCGATGAGGGCTGGTTGTATCTCGCAGTAGTCATCGACCTGTGGTCACGCGCCGTCATTGGCTG
GTCGATGTCACTGCGAATGACAGCACAACTGGCCTGTGATGCACTGCAAATGGCGTTGTGGCGGAGAAGACGCCCGGAAA
GCGTCATTGTTCATACGGACCGTGGTGGTCAATACTGTTCAGGGGATTATCAGGCGCTGCTGAAGCGACACAACCTGCGT
GGCAGTATGAGTGCGAAAGGCTACTGTTATGACAATGCCTGTGTGGAAAGCTTCTTTCATTCGCTGAAGGTGGAATATAT
CCACGGGGAACGCTTTAGCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAGTGTGATTACAATCGCTGGC
GTCGTCACAGTGCCTGTGGCGGTCTCAGCCCGGAACAATTTGAAAACCATAATCTCGCTTAG

Protein sequence :
MSALNDNWRSRLRNWPSSKRPRQLREAPEMKYVFIENHRAEFSIKAMCRVLRVARSGWYVWLWRRHQMSLRQQFRLTCDA
AVHKAFFEAKQRYGAPRLADEMPEFNIKTIAASLRRQGLRAKASRKFSPVSYRAHGLPVLENLLEQDFSASGPNQKWAGD
ITYLRTDEGWLYLAVVIDLWSRAVIGWSMSLRMTAQLACDALQMALWRRRRPESVIVHTDRGGQYCSGDYQALLKRHNLR
GSMSAKGYCYDNACVESFFHSLKVEYIHGERFSSREIMRATVFNYIECDYNRWRRHSACGGLSPEQFENHNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 4e-130 99
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 9e-111 86
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 3e-109 86
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-110 86
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 4e-43 43
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 4e-43 43
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 4e-43 43
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-43 43
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-43 43
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-43 43
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-43 43
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-43 43
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-43 43
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-43 43
unnamed AAF09022.1 unknown Not tested SHI-O Protein 4e-44 43
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 9e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
i14_1117 YP_006153243.1 transposase insF VFG1631 Protein 2e-130 99
i14_1117 YP_006153243.1 transposase insF VFG1706 Protein 7e-44 43