Gene Information

Name : i02_4887 (i02_4887)
Accession : YP_006152027.1
Strain : Escherichia coli clone D i2
Genome accession: NC_017651
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4919730 - 4920215 bp
Length : 486 bp
Strand : +
Note : -

DNA sequence :
ATGACAACCTTTTCGCATAGCTCCACCACGCCTTCTGTTTCCGTAACCACTGCATCAGGGAATAACCAGTCTCAACTGGT
TGCCACTCCCGTCCCTGATGAACAGCGCATCAGCTTCTGGCCACAGCACTTTGGCCTCATTCCACAGTGGGTGACCCTGG
AGCCCCGTGTCCTCGGCTGGATGGACCGTCTGTGCGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAAC
GGTGGCGCATTTATGGCACCCGAACCGGATGACGATGATGACGAAACATGGGTACTGTTCAATGCCATGAACGGTAACCG
CGCTGAAATGAGCCCGGAAGCTGCCGGCATTGCCGCCTGTCTGATGGCGTACAGTCATCACGCCTGTCGTACAGAGAATT
ATGCCATGACGGTCCATTATTATCGGTTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATC
GACTGA

Protein sequence :
MTTFSHSSTTPSVSVTTASGNNQSQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVLGWMDRLCEDYCGGIWNLYTLNN
GGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMAYSHHACRTENYAMTVHYYRLRDYALQHPECSAIMRII
D

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 4e-59 98
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 8e-58 97
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 1e-57 97
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 1e-57 97
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 1e-62 97
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 2e-55 97
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 2e-62 96
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 3e-63 96
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 2e-55 96
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 3e-55 94
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 3e-55 94
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 1e-61 94
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 9e-56 93
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-55 93
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 1e-59 93
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-55 93
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 2e-61 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
i02_4887 YP_006152027.1 hypothetical protein VFG1677 Protein 5e-63 97
i02_4887 YP_006152027.1 hypothetical protein VFG1527 Protein 1e-62 96
i02_4887 YP_006152027.1 hypothetical protein VFG1616 Protein 1e-63 96
i02_4887 YP_006152027.1 hypothetical protein VFG0659 Protein 7e-56 94