Gene Information

Name : sgbU (i02_4071)
Accession : YP_006151221.1
Strain : Escherichia coli clone D i2
Genome accession: NC_017651
Putative virulence/resistance : Unknown
Product : putative L-xylulose 5-phosphate 3-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4058727 - 4059620 bp
Length : 894 bp
Strand : +
Note : -

DNA sequence :
ATGCGCAAATCGACTCCATCTGGGGAGGCAAGCGTGCGTAATCATCCGTTAGGCATTTATGAAAAAGCGCTGGCGAAAGA
TCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGTGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACG
AACGGTTGTCACGTCTTGACTGGAGCGCCGCACAACGTACTTCGCTGGTTACCGCGATGATCGAAACGGGTGTTGCTATT
CCGTCAATGTGCCTGTCCGCACATCGTCGTTTTCCTTTTGGTAGCCGGGACGACGCCGTGCGCCAGCGGGCGCGGGAGAT
TATGAGTAAAGCGATTCGCCTGGCGCGCGATCTCGGCATTCGTACTATTCAACTGGCAGGTTACGACGTCTATTACGAAG
ACCACGACGAAGGCACCCAGCAACGTTTTGCTGAAGGGCTGGCGTGGGCGGTCGAACAGGCGGCGGCATCACAAGTCATG
CTGGCAGTGGAGATTATGGATACTGCGTTTATGAACTCCATCAGCAAATGGAAAAAATGGGACGAGATGCTCGCCTCGCC
GTGGTTCACCGTCTACCCGGACGTCGGCAACCTCAGCGCCTGGGGCAATGATGTTCCCGCCGAACTGAAACTGGGCATCG
ACCGTATCGCCGCCATCCACCTGAAAGACACTCAACCCGTTACCGAACATAGCCCCGGACAGTTCCGCGATGTGCCGTTT
GGCGAAGGCTGTGTCGATTTTGTTGGCATCTTCAAAACGCTGCATGAGCTGAACTATCGCGGATCATTTCTGATTGAAAT
GTGGACCGAAAAAGCCAAAGAGCCGGTGCTGGAGATTATTCAGGCGCGGCGCTGGATTGAAGCGCGTATGCAGGAGGCCG
GATTTATATGTTAG

Protein sequence :
MRKSTPSGEASVRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRTSLVTAMIETGVAI
PSMCLSAHRRFPFGSRDDAVRQRAREIMSKAIRLARDLGIRTIQLAGYDVYYEDHDEGTQQRFAEGLAWAVEQAAASQVM
LAVEIMDTAFMNSISKWKKWDEMLASPWFTVYPDVGNLSAWGNDVPAELKLGIDRIAAIHLKDTQPVTEHSPGQFRDVPF
GEGCVDFVGIFKTLHELNYRGSFLIEMWTEKAKEPVLEIIQARRWIEARMQEAGFIC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 3e-63 55