|
Name : gspF (i02_3386) Accession : YP_006150546.1 Strain : Escherichia coli clone D i2 Genome accession: NC_017651 Putative virulence/resistance : Virulence Product : putative type II secretion protein GspF Function : - COG functional category : - COG ID : - EC number : - Position : 3392843 - 3394066 bp Length : 1224 bp Strand : - Note : - DNA sequence : ATGGCACTGTTTTACTATCAGGCGCTGGAGCGTAATGGTCGCAAAACCAAAGGAATGATTGAGGCGGATTCCGCGCGTCA TGCCCGTCAATTGTTGCGTGGTAAAGAGCTTATCCCCGTGCACATTGAAGCCCGGCTGAATGCTTCGACAGGGGGAATGT TGCAGCGTCGGCGGCATGCACATCGTCGCGTGGCGGCGGCAGATTTGGCGCTGTTCACACGCCAACTGGCAACGCTGGTG CAGGCAGCAATGCCGCTGGAAACCTGCTTACAGGCGGTCAGTGAGCAAAGTGAAAAACTGCATGTAAAAAGCCTCGGAAT GGCGCTGCGCAGCCGGATTCAGGAAGGTTATACCCTGTCGGACAGCCTGCGCGAACATCCCCGCGTCTTTGACTCCCTGT TTTGTTCGATGGTCGCTGCCGGAGAAAAATCCGGACATCTCGACGTGGTGCTCAATCGCCTGGCGGATTACACCGAACAG CGGCAGCATCTGAAATCACGCCTGCTGCAGGCCATGCTCTACCCGCTGGTACTGCTGGTGGTGGCAACGGGCGTGGTCAC TATTTTGCTGACGGCAGTAGTGCCGAAAATTATCGAACAGTTTGATCATCTCGGACACGCGCTGCCTGCCTCCACCCGAA TGCTCATCGCCATGAGCGACACGTTACAGACCAGCGGCGTGTACTGGCTGGCGGGTTTGCTGGGGCTTCTGGTGCTGGGG CAACGGCTACTCAAAAATCCTGCGATGCGCCTGCGCTGGGATAAAACCTTGCTGCGTTTGCCCGTGACGGGGCGTGTTGC GCGCGGACTGAATACGGCGCGTTTTTCCCGCACATTAAGCATCCTCACCGCCAGCAGTGTTCCGCTGCTGGAAGGCATTC AGACCGCCGCCGCCGTGTCGGCAAATCGTTATGTCGAGCAACAACTGCTGCTGGCGGCAGATCGCGTCCGCGAAGGAAGC AGCCTGCGCGCCGCGCTGGCGGAGTTGCGCCTGTTCCCGCCGATGATGCTGTACATGATCGCCTCCGGCGAACAGAGCGG TGAACTGGAAACCATGCTTGAACAGGCCGCGGTCAACCAGGAACGGGAATTTGATACCCAGGTGGGGCTGGCGTTAGGGC TGTTTGAGCCGGCGCTGGTGGTGATGATGGCGGGCGTGGTGCTGTTTATCGTCATCGCCATCCTCGAACCGATGCTGCAA CTGAACAATATGGTTGGAATGTAA Protein sequence : MALFYYQALERNGRKTKGMIEADSARHARQLLRGKELIPVHIEARLNASTGGMLQRRRHAHRRVAAADLALFTRQLATLV QAAMPLETCLQAVSEQSEKLHVKSLGMALRSRIQEGYTLSDSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQ RQHLKSRLLQAMLYPLVLLVVATGVVTILLTAVVPKIIEQFDHLGHALPASTRMLIAMSDTLQTSGVYWLAGLLGLLVLG QRLLKNPAMRLRWDKTLLRLPVTGRVARGLNTARFSRTLSILTASSVPLLEGIQTAAAVSANRYVEQQLLLAADRVREGS SLRAALAELRLFPPMMLYMIASGEQSGELETMLEQAAVNQEREFDTQVGLALGLFEPALVVMMAGVVLFIVIAILEPMLQ LNNMVGM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-154 | 99 |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-154 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF | YP_006150546.1 | putative type II secretion protein GspF | VFG2049 | Protein | 5e-147 | 97 |
| gspF | YP_006150546.1 | putative type II secretion protein GspF | VFG0181 | Protein | 6e-69 | 47 |
