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Name : gabD (i02_2940) Accession : YP_006150110.1 Strain : Escherichia coli clone D i2 Genome accession: NC_017651 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : - COG ID : - EC number : - Position : 2958506 - 2959954 bp Length : 1449 bp Strand : + Note : - DNA sequence : ATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGCGAGGT CATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCTGATGAAACCCGCGCCGCTA TCGACGCCGCCAACCGCGCCCTGCCCGTCTGGCGTGCGCTCACTGCCAAAGAACGCGCCAACATTCTGCGCAACTGGTTC AATTTAATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGCAAACCACTGGCTGAAGCGAAAGG CGAAATCAGCTACGCCGCCTCATTTATTGAGTGGTTTGCAGAAGAAGGCAAACGTATTTATGGCGACACCATTCCCGGTC ATCAGGCCGATAAACGCCTGATTGTTATCAAGCAGCCGATTGGCGTCACCGCGGCTATCACGCCGTGGAACTTCCCGGCG GCGATGATTACCCGTAAAGCCGGTCCGGCACTGGCGGCAGGCTGCACGATGGTGCTGAAGCCCGCCAGTCAGACGCCGTT CTCTGCGCTGGCGCTGGCAGAACTGGCGATTCGCGCGGGCGTTCCGGCTGGCGTGTTTAACGTAGTCACCGGTTCGGCGG GCGCGGTCGGTAACGAACTGACCAGCAACCCGCTGGTGCGCAAGCTGTCGTTTACCGGCTCGACCGAAATTGGCCGTCAG TTAATGGAACAGTGCGCGAAAGACATCAAAAAAGTGTCGCTGGAGCTGGGCGGCAACGCACCGTTTATTGTCTTTGACGA TGCCGATCTCGATAAAGCCGTGGAAGGCGCGCTGGCCTCGAAATTCCGTAACGCCGGGCAAACCTGCGTCTGCGCCAACC GCCTGTATGTGCAGAACGGCGTGTATGACCGCTTTGCCGAAAAATTGCAGCAGGCGGTGAGCAAACTGCACATCGGCAAC GGGCTGGAGAAAGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGC GCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCACATGAACGCGGCGGTAACTTCTTCCAGCCGACCATTCTGG TGGACGTTCCGGCTAACGCCAAAGTGTCGAAAGAAGAGACGTTTGGCCCCCTCGCCCCGCTGTTCCGTTTTAAAGATGAA GCCGATGTGATTGCGCAAGCCAATGACACCGAATTTGGCCTTGCAGCCTATTTCTACGCCCGTGATTTAAGCCGCGTCTT CCGCGTGGGCGAAGCACTGGAGTACGGCATCATCGGCATCAACACCGGCATTATTTCCAATGAAGTGGCCCCGTTTGGCG GCATTAAAGCCTCGGGTCTGGGTCGTGAAGGTTCGAAGTATGGCATCGAAGATTACTTAGAAATCAAATATATGTGCATC GGTCTTTAA Protein sequence : MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPVWRALTAKERANILRNWF NLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQNGVYDRFAEKLQQAVSKLHIGN GLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIIGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-153 | 66 |
