Gene Information

Name : sfaC (i02_1130)
Accession : YP_006148337.1
Strain : Escherichia coli clone D i2
Genome accession: NC_017651
Putative virulence/resistance : Virulence
Product : putative F1C and S fimbrial switch regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1153499 - 1153783 bp
Length : 285 bp
Strand : -
Note : -

DNA sequence : 
TTGAATTGTCAAAAACAAGTCAGCCACTTATTATCCTTTTGCTTATATAGAGAGGATGATGATATGCAGAATGAAATAAT
GGGTTTTCTGAGCAGACATAATGGAGGGAAAACCGCAGAAATTGCGGAGGCGCTGGCGGTAACGGATTACCAGGCACGCT
ATTACCTGTTATTACTGGAAAAAGAAGGTATGGTTCAGCGCTCTCCGTTAAGACGAGGCATGGCAACATACTGGTTTCTG
AAAGGAGAGATGCAGGCGGGACAGAGCTGTTCTTCCACAACTTAA

Protein sequence : 
MNCQKQVSHLLSFCLYREDDDMQNEIMGFLSRHNGGKTAEIAEALAVTDYQARYYLLLLEKEGMVQRSPLRRGMATYWFL
KGEMQAGQSCSSTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sfaC CAC16949.1 SfaC protein Virulence PAI III 536 Protein 9e-29 99
prfI CAD42033.1 PrfI protein Virulence PAI II 536 Protein 1e-27 94
papI_2 NP_757037.1 PapI protein Virulence PAI II CFT073 Protein 4e-27 92
fooI AAT48694.1 fimbrial regulatory protein Virulence PAI I 4787 Protein 3e-27 92
papI AAL67419.1 PapI Virulence PAI II CFT073 Protein 3e-27 92
papI NP_755468.1 PapI protein Virulence PAI I CFT073 Protein 6e-27 91
papI YP_002414019.1 pap operon regulatory protein PapI Not tested Not named Protein 6e-27 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sfaC YP_006148337.1 putative F1C and S fimbrial switch regulatory protein VFG1640 Protein 4e-29 99
sfaC YP_006148337.1 putative F1C and S fimbrial switch regulatory protein VFG1552 Protein 4e-28 94
sfaC YP_006148337.1 putative F1C and S fimbrial switch regulatory protein VFG0891 Protein 1e-27 92
sfaC YP_006148337.1 putative F1C and S fimbrial switch regulatory protein VFG0880 Protein 2e-27 91