Gene Information

Name : murD (CE10_0090)
Accession : YP_006142229.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Unknown
Product : UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 105882 - 107198 bp
Length : 1317 bp
Strand : +
Note : -

DNA sequence :
ATGGCTGATTACCAGGGTAAAAATGTTGTCATTATCGGCCTGGGCCTCACCGGGCTTTCCTGCGTGGACTTTTTCCTCGC
TCGCGGTGTGACGCCGCGCGTTATGGATACGCGTATGACACCGCCAGGCCTGGATAAATTACCCGAAGCTGTAGAACGCC
ACACGGGCGGTCTGAATGATGAATGGCTGATGGCGGCCGATCTGATTGTCGCCAGTCCCGGTATTGCACTGGCGCATCCA
TCCTTAAGTGCTGCCGCTGATGCCGGAATCGAAATCGTTGGCGATATCGAGCTGTTCTGTCGTGAAGCACAAGCACCGAT
TGTGGCGATCACCGGTTCTAACGGCAAAAGCACGGTCACCACGCTAGTGGGTGAAATGGCGAAAGCGGCGGGGGTTAACG
TTGGTGTGGGTGGCAATATTGGCCTGCCTGCGTTGATGCTGCTGGATGATGAGTGCGAACTGTACGTGCTGGAGCTGTCG
AGCTTCCAGCTTGAAACCACCTCCAGTTTACAGGCGGTAGCAGCGACCATTCTGAACGTAACTGAAGATCATATGGATCG
CTATCCGTTTGGTTTACAACAGTATCGTGCAGCAAAACTGCGCATTTACGAAAACGCAAAAATTTGCGTGGTTAATGCTG
ATGATGCCTTAACAATGCCGATTCGCGGTGCGGATGAACGCTGCGTCAGCTTTGGCGTCAACATGGGTGACTATCACCTG
AATCATCAGCAGGGTGAAACCTGGCTGCGGGTGAAGGGCGAGAAAGTGCTGAACGTGAAAGAAATGAAACTTTCCGGGCA
GCATAACTACACCAATGCACTGGCAGCTCTGGCACTGGCAGATGCCGCTGGTTTGCCGCGCGCCAGCAGCCTGAAAGCGT
TAACCACATTCACTGGTCTGCCGCATCGCTTTGAAGTTGTGCTGGAGCATAACGGTGTGCGCTGGATTAACGATTCAAAA
GCGACCAACGTCGGCAGTACGGAAGCGGCACTGAATGGCCTGCACGTAGACGGCACGCTGCATTTGTTGCTGGGCGGCGA
TGGTAAATCGGCAGATTTTAGCCCACTGGCGCGTTACCTGAATGGCGATAACGTACGTCTGTATTGTTTCGGTCGGGACG
GCGCGCAGCTGGCGGCGCTACGCCCGGAAGTGGCAGAACAAACCGAAACCATGGAACAGGCGATGCGCTTGCTGGCTCCG
CGTGTTCAGCCGGGCGATATGGTTCTGCTCTCCCCGGCCTGTGCCAGCCTTGATCAGTTCAAGAACTTTGAACAACGAGG
CAATGAGTTTGCCCGTCTGGCGAAGGAGTTAGGTTGA

Protein sequence :
MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGGLNDEWLMAADLIVASPGIALAHP
SLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELS
SFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKICVVNADDALTMPIRGADERCVSFGVNMGDYHL
NHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSK
ATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAP
RVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 3e-53 45
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 3e-53 45