Gene Information

Name : CE10_5035 (CE10_5035)
Accession : YP_006146984.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Unknown
Product : IS600 ORF2 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5143781 - 5144599 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
ATGTGTCAGGTATTTGGTGTATCCAGGAGCGGTTATTACAACTGGGTACAGCATGAACCCTCAGACAGAAAACAAAGTGA
TGAGCGGCTAAAACTGGAGATTAAGGTGGCACATATCCGCACTCGCGAAACATATGGAACCCGGCGGCTCCAGACGGAGC
TGGCAGAGAATGGCATCATCGTTGGTCGTGACCGACTGGCACGTCTTCGTAAGGAGCTAAGGCTACGCTGTAAGCAGAAA
CGCAAGTTCAGAGCGACTACGAACCCGAACCACAATCTGCCAGTTGCGCCAAATCTGCTGAACCAGACGTTCGCTCCTAC
AGCACCAAATCAGGTCTGGGTGGCGGACCTGACGTATGTTGCCACACAGGAGGGATGGTTGTACCTCACTGGCATCAAAG
ATGTTTATACGTGCGAAATTGTCGGCTACGCCATGGGAGAGCGCATGACAAAAGAGCTGACAGGTAAAGCCCTGTTTATG
GCGCTCAGGAGCCAGCGCCCACCTGCCGGGCTAATCCACCACTCTGATCGAGGTTCACAGTACTGCGCATACGATTACCG
GGTCATACAGGAGCAGTTTGGTCTGAAAACATCAATGTCGCGTAAAGGTAACTGTTACGACAACGCTCCGATGGAAAGCT
TCTGGGGAACGCTGAAAAATGAGAGCCTGAGCCACTATCGTTTTAATAACCGGGATGAAGCCATCTCAGTAATACGGGAA
TACATTGAGATTTTCTACAATCGTCAGCGTCGTCACTCTCGTCTGGGGAATATCTCCCCGGCAGCCTTCAGGGAAAAATA
TCATCAGATGGCTGCTTAA

Protein sequence :
MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQK
RKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLTGIKDVYTCEIVGYAMGERMTKELTGKALFM
ALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIRE
YIEIFYNRQRRHSRLGNISPAAFREKYHQMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF09030.1 unknown Not tested SHI-O Protein 6e-115 99
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 6e-115 99
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 4e-114 99
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-113 99
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 4e-114 99
unnamed AAF09022.1 unknown Not tested SHI-O Protein 4e-114 99
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 3e-114 99
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 2e-114 99
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 7e-115 99
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 8e-44 43
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 8e-44 43
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 8e-44 43
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 6e-41 41
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 3e-42 41
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 4e-42 41
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 6e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_5035 YP_006146984.1 IS600 ORF2 protein VFG1706 Protein 1e-114 99
CE10_5035 YP_006146984.1 IS600 ORF2 protein VFG1631 Protein 4e-41 41