Gene Information

Name : CE10_5034 (CE10_5034)
Accession : YP_006146983.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Unknown
Product : IS600 ORF1 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5143446 - 5143745 bp
Length : 300 bp
Strand : +
Note : -

DNA sequence :
ATGAGCAGAAAAACCCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCTCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAG
CGAGATATATTAAAAAAAGCAACGTATTTTGCACAGGAGTCGCTGAAAAATACGCGTTAA

Protein sequence :
MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLE
RDILKKATYFAQESLKNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 2e-38 99
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 2e-38 99
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 1e-33 99
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 1e-33 99
unnamed AAF09021.1 unknown Not tested SHI-O Protein 7e-38 98
unnamed AAF09029.1 unknown Not tested SHI-O Protein 7e-38 98
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 3e-38 98
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-38 98
EXB21 ABD94708.1 putative transposase Not tested ExoU island B Protein 2e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_5034 YP_006146983.1 IS600 ORF1 protein VFG1707 Protein 1e-38 98