Gene Information

Name : CE10_5029 (CE10_5029)
Accession : YP_006146978.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Unknown
Product : transposase ORF A, IS911
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5138880 - 5139182 bp
Length : 303 bp
Strand : -
Note : -

DNA sequence :
ATGCTCACCTCAGAACAACACAGGTGCCATAATGAAAAAAGAAATTTCAGCGCAGAGTTTAAACGCAAATCCGCTCAATT
GGTCGTTGACCAGAAATACACCGTGGCAGATGCAGCCAGCGCTATGGATGTCGGCCTTTCCACAATGACGCGATGGGTGA
AACAATTACGTGATGAGCGGCAGGGAAAAACACCAAAAGCCTCCCCCATTACCCCGGAACAAATTGAAATCCGTGAGCTC
AGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAGGCTACCGCGCTCTTGA

Protein sequence :
MLTSEQHRCHNEKRNFSAEFKRKSAQLVVDQKYTVADAASAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIREL
RKKLQRIEMENEILKRLPRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7045 CAD33744.1 - Not tested PAI I 536 Protein 4e-33 95
orfA CAE85179.1 OrfA protein, IS911 Not tested PAI V 536 Protein 4e-33 95
api80 CAF28554.1 putative transposase Not tested YAPI Protein 2e-32 93
insN YP_002152325.1 transposase for insertion sequence element IS911 Not tested Not named Protein 4e-32 92
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-25 72
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 1e-25 72
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 1e-25 72
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-25 72
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 1e-25 72
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-25 72
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-25 72
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-25 72
unnamed CAD42034.1 hypothetical protein Not tested PAI II 536 Protein 5e-23 63
aec66 AAW51749.1 Aec66 Not tested AGI-3 Protein 7e-18 54
ECO111_3778 YP_003236113.1 putative IS602 transposase OrfA Not tested LEE Protein 1e-17 54
unnamed ACU09431.1 IS911 transposase orfA Not tested LEE Protein 1e-17 53
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 1e-16 52
ECs4535 NP_312562.1 hypothetical protein Not tested LEE Protein 9e-18 48
unnamed AAC31483.1 L0004 Not tested LEE Protein 6e-18 48
Z5088 NP_290240.1 hypothetical protein Not tested LEE Protein 9e-18 48
trp1329A CAB46577.1 IS1329 transposase A Not tested HPI Protein 1e-17 47
tnpA CAB61575.1 transposase A Not tested HPI Protein 3e-17 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_5029 YP_006146978.1 transposase ORF A, IS911 VFG1485 Protein 2e-33 95
CE10_5029 YP_006146978.1 transposase ORF A, IS911 VFG1123 Protein 4e-26 72
CE10_5029 YP_006146978.1 transposase ORF A, IS911 VFG1553 Protein 2e-23 63
CE10_5029 YP_006146978.1 transposase ORF A, IS911 VFG0784 Protein 3e-18 48