Gene Information

Name : papH (CE10_4861)
Accession : YP_006146817.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Virulence
Product : minor pilin protein PapH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4966523 - 4967110 bp
Length : 588 bp
Strand : +
Note : -

DNA sequence :
ATGAGACTGCGATTCTCTGTTCCACTTTTCTTTTTTGGCTGTGTGTTTGTTCATGGTGTTTTTGCCGGTCCGTTTCCTCC
GCCCGGCATGTCCCTTCCTGAATACTGGGGAGAAGAACACGTATGGTGGGACGGCAGGGCTGCTTTTCATGGTGAGGTTG
TCAGACCTGCCTGTACTCTGGCGATGGAAGACGCCTGGCAGATTATCGATATGGGGGAAACCCCGGTTCGGGATTTACAG
AATGGTTTTTCCGGACCTGAAAGAAAATTCAGCCTCCGGCTCAGGAACTGTGAATTTAACAGTCAGGGTGGGAACCTTTT
CTCTGATTCCCGGATAAGGGTGACTTTCGATGGCGTCCGGGGTGAAACGCCGGATAAGTTTAATTTATCCGGTCAGGCAA
AAGGAATTAATCTGCAGATAGCTGATGCCAGGGGAAATATTGCCCGGGCAGGGAAAGTAATGCCTGCAATACCATTGACG
GGTAATGAAGAAGCGCTGGATTACACCCTCAGAATTGTGCGAAACGGAAAAAAACTTGAAGCCGGAAATTATTTTGCCGT
GCTGGGATTCCGGGTCGATTATGAGTGA

Protein sequence :
MRLRFSVPLFFFGCVFVHGVFAGPFPPPGMSLPEYWGEEHVWWDGRAAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQ
NGFSGPERKFSLRLRNCEFNSQGGNLFSDSRIRVTFDGVRGETPDKFNLSGQAKGINLQIADARGNIARAGKVMPAIPLT
GNEEALDYTLRIVRNGKKLEAGNYFAVLGFRVDYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papH AAL67416.1 PapH Virulence PAI II CFT073 Protein 5e-79 99
papH YP_002414016.1 minor pilin protein PapH Not tested Not named Protein 2e-78 99
papH NP_755466.1 PapH protein Virulence PAI I CFT073 Protein 7e-79 99
papH_2 NP_757035.1 PapH protein Virulence PAI II CFT073 Protein 7e-79 99
papH AAZ04425.1 fimbrial regulatory protein Virulence PAI I APEC-O1 Protein 4e-77 99
papH YP_854255.1 minor pilin subunit PapH Virulence PAI I APEC-O1 Protein 6e-77 99
prfH CAD42030.1 PrfH protein Virulence PAI II 536 Protein 5e-77 96
pixH CAE85160.1 PixH protein Not tested PAI V 536 Protein 9e-58 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papH YP_006146817.1 minor pilin protein PapH VFG0894 Protein 2e-79 99
papH YP_006146817.1 minor pilin protein PapH VFG0883 Protein 2e-79 99
papH YP_006146817.1 minor pilin protein PapH VFG1549 Protein 2e-77 96