Gene Information

Name : papI2 (CE10_4858)
Accession : YP_006146814.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Virulence
Product : pap operon regulatory protein PapI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4964719 - 4964940 bp
Length : 222 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGAATGAAATACTGGAATTTCTGAACAGGCATGATGGAGGGAAAACGGCAGAAATTGCGGAGGCGCTGGCGGTAAC
GGATTACCAGGCCCGCTATTACCTGTTATTACTGGAAAAAGCAGGTATGGTTCAGCGCTCACCATTAAGACGGGGCATGG
CAACATACTGGCTTCTGAAAGGAGAGAAGCAGGCGGGGCAGAGTTGTTCTTCCACAACTTAA

Protein sequence : 
MKNEILEFLNRHDGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYWLLKGEKQAGQSCSSTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papI NP_755468.1 PapI protein Virulence PAI I CFT073 Protein 2e-28 99
papI YP_002414019.1 pap operon regulatory protein PapI Not tested Not named Protein 2e-28 99
papI_2 NP_757037.1 PapI protein Virulence PAI II CFT073 Protein 2e-28 98
papI AAL67419.1 PapI Virulence PAI II CFT073 Protein 2e-28 98
fooI AAT48694.1 fimbrial regulatory protein Virulence PAI I 4787 Protein 2e-28 98
prfI CAD42033.1 PrfI protein Virulence PAI II 536 Protein 2e-27 94
sfaC CAC16949.1 SfaC protein Virulence PAI III 536 Protein 4e-26 88
afaF ADD91749.1 putative transcriptional regulator AfaF-VIII Not tested PAI-I AL862 Protein 8e-10 47
afaF AAK16195.1 AfaF Virulence PAI-I AL862 Protein 8e-10 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papI2 YP_006146814.1 pap operon regulatory protein PapI VFG0880 Protein 5e-29 99
papI2 YP_006146814.1 pap operon regulatory protein PapI VFG0891 Protein 7e-29 98
papI2 YP_006146814.1 pap operon regulatory protein PapI VFG1552 Protein 9e-28 94
papI2 YP_006146814.1 pap operon regulatory protein PapI VFG1640 Protein 2e-26 88