Gene Information

Name : nrfC (CE10_4786)
Accession : YP_006146743.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Virulence
Product : formate-dependent nitrite reductase, 4Fe4S subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4890223 - 4890894 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence : 
ATGACCTGGTCACGTCGCCAGTTTCTCACCGGCGTCGGTGTGCTGGCCGCCGTCAGCGGCACCGCAGGGCGCGTGGTGGC
GAAAACGTTGAATATCAATGGTGTGCGTTACGGCATGGTGCATGACGAGTCGTTATGCATCGGCTGTACCGCCTGTATGG
ATGCTTGTCGGGAAGTGAACAAGGTGCCGGAAGGCGTCTCGCGCCTGACAATTATTCGTAGCGAGCCGCAGGGCGAATTT
CCTGATGTGAAATATCGCTTCTTCCGTAAGTCTTGCCAGCACTGCGATCGTGCGCCGTGCGTTGACGTCTGCCCGACCGG
TGCGTCTTTTCGCGATGCCGCCAGCGGGATTGTCGATGTAAATCCGGATCTCTGCGTCGGTTGTCAGTACTGCATCGCCG
CCTGTCCGTACCGCGTGCGCTTTATCCATCCGGTCACGAAGACAGCGGACAAATGCGATTTCTGCCGTAAGACCAATTTG
CAGGCCGGTAAGCTGCCCGCGTGCGTTGAGGCTTGCCCGACGAAGGCGCTGACGTTTGGCAATCTGGACGATCCTAACAG
TGAGATTTCGCAACTGCTGCACCAGAAGCCTACTTACCGCTACAAGCTGGCGCTGGGAACCAAACCGAAGCTGTACCGCG
TACCGTTTAAATACGGGGAGGTGAGCCAATGA

Protein sequence : 
MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDESLCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEF
PDVKYRFFRKSCQHCDRAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNL
QAGKLPACVEACPTKALTFGNLDDPNSEISQLLHQKPTYRYKLALGTKPKLYRVPFKYGEVSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 8e-32 41
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 8e-32 41
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 1e-31 41
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 1e-31 41
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 9e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nrfC YP_006146743.1 formate-dependent nitrite reductase, 4Fe4S subunit VFG0486 Protein 5e-32 41