Gene Information

Name : ybbA (CE10_0476)
Accession : YP_006142603.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Resistance
Product : putative transporter subunit: ATP-binding component of ABC superfamily
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 530143 - 530829 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGCCAGCGGAAAACATTGTTGAAGTTCATCATCTTAAGAAGTCCGTCGGTCAGGGGGAGCATGAACTCTCCATCCTCAC
CGGAGTTGAGCTGGTTGTCAAACGTGGCGAGACCATCGCACTGGTGGGTGAGTCGGGATCGGGTAAGTCAACCTTGCTGG
CGATCCTCGCTGGGCTGGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCTCTACATAATATGGACGAAGAA
GCGCGGGCAAAGTTACGCGCGAAGCACGTAGGTTTTGTTTTTCAGTCATTTATGTTAATTCCTACCCTTAACGCGCTGGA
AAACGTCGAGCTTCCGGCGCTGCTGCGCGGTGAAAGTAGCGTGGAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGT
TAGGGCTGGGCAAACGTCTTGATCATCTCCCGGCACAGCTTTCCGGTGGCGAACAGCAACGGGTGGCGCTGGCGCGTGCC
TTTAACGGTCGGCCAGATGTGCTGTTTGCCGACGAACCCACCGGCAACCTTGACCGCCAGACGGGCGATAAAATTGCCGA
CCTGCTGTTTTCCCTCAACCGTGAACATGGCACCACGTTGATTATGGTGACTCACGACCTGCAACTGGCGGCACGCTGCG
ACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGA

Protein sequence : 
MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEE
ARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSVESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLRLVNGQLQEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-34 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-34 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA YP_006142603.1 putative transporter subunit: ATP-binding component of ABC superfamily NC_008702.1.4606598. Protein 1e-33 45
ybbA YP_006142603.1 putative transporter subunit: ATP-binding component of ABC superfamily NC_012469.1.7686878. Protein 1e-39 44
ybbA YP_006142603.1 putative transporter subunit: ATP-binding component of ABC superfamily CP001581.1.gene798.p Protein 2e-36 41