Gene Information

Name : CE10_4287 (CE10_4287)
Accession : YP_006146273.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4356780 - 4357622 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence :
ATGTCTGAAATCACAGCCCCCCGTCCGGAAGTGGTCAACGGGCATACGGACGTTATCTGCTCAACCAGTATCCGCCACAT
TCTGGCTGTACAAAAGAGTACGCTGCTGCAAATCGACACACTTACCCGGCAACTGGCAGAAATCTCAGCAATGACAGACA
GTATTGGCGGTAAAACCGCACTGGACTGGGCGATGAAACAGGATTTTCGCTGTGGTTGCTGGCTGATGGAAAAACCTGAA
ACGGCAATGAAAGCCATCACCCGCAATCTCGATCGCGAAATCTGGCGTGACCTGATGCAACGTTCCGGGATGCTGTCATT
AATGGATGCGCAGGCCCGTGAGACATGGTACCGGTCACTGGAATACGATAATTTTCCGGAAATCAGCGAAGCGAACATTC
TGAGCACATTTAAACAACTGCACCAGAACAAAGATGAAGTGTTTGAGCGAGGGGTGATCAACGTCTTCAGGGGACTGAGC
TGGAATTACAAAACTAATTGCCCCTGTAAATTTGGCAGTAAAATTATCATTAACAACCTGGTAAGGTGGGACCGGTGGGG
ATTTCATCTTATCACCGGGCAACAGGCTGACCGACTCGCCGATCTGGAAAGAATGTTGCACCTGTTCAGCGGTAAACCGA
TCCCCGACAACCGGGAAAACATCACCATTCATCTGGATGATCACATCCGGTCTGTTCAGGGTAAAGAGTGCTATGAAGAT
GAGATGTTCATCATCAGATACTTTAAGAAAGGCTCCGCGCACATCAGGTTCAGGAAACCAGAACTGGTTGACAGGCTGAA
TGATATTATTGCGAAACACTATCCGGGAGTGTTACCTTCATAA

Protein sequence :
MSEITAPRPEVVNGHTDVICSTSIRHILAVQKSTLLQIDTLTRQLAEISAMTDSIGGKTALDWAMKQDFRCGCWLMEKPE
TAMKAITRNLDREIWRDLMQRSGMLSLMDAQARETWYRSLEYDNFPEISEANILSTFKQLHQNKDEVFERGVINVFRGLS
WNYKTNCPCKFGSKIIINNLVRWDRWGFHLITGQQADRLADLERMLHLFSGKPIPDNRENITIHLDDHIRSVQGKECYED
EMFIIRYFKKGSAHIRFRKPELVDRLNDIIAKHYPGVLPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57572.1 unknown Not tested LEE Protein 2e-122 93
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 6e-123 92
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 4e-124 92
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 6e-123 92
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 5e-121 92
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 9e-122 90
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 3e-122 90
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 3e-120 89
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 5e-120 89
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 5e-120 89
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 2e-120 89
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 2e-120 89
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 1e-110 89
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-120 88
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-120 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_4287 YP_006146273.1 hypothetical protein VFG1533 Protein 2e-124 92
CE10_4287 YP_006146273.1 hypothetical protein VFG0666 Protein 2e-120 89
CE10_4287 YP_006146273.1 hypothetical protein VFG1685 Protein 7e-111 89