Gene Information

Name : CE10_4281 (CE10_4281)
Accession : YP_006146267.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4354083 - 4354562 bp
Length : 480 bp
Strand : +
Note : -

DNA sequence :
ATGAAAATCGTTTCTCAGAACACAACTGCTCTTTCTTCAGCCACAGCACCAGGGAATAACCAGCCCCAACTGGTTGCTAC
TCCCGTCCCTGATGAACAACGTATCAGCTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTGACCCTGGAGCCCC
GTGTCTTCGGCTGGATGGACCGTCTGTGCGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAACGGCGGG
GCATTTATGGCACCCGAACCGGATGACGATGATGACGAAACATGGGTACTGTTCAATGCCATGAACGGTAACCGCGCTGA
AATGAGCCCGGAAGCCGCCGGCATTGCTGCCTGTCTGATGACGTACAGTCATCATGCCTGTCGTACGGAGTGTTATGCCA
TGACGGTCCATTATTACCGGTTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATCGACTGA

Protein sequence :
MKIVSQNTTALSSATAPGNNQPQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGG
AFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 2e-60 94
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 2e-60 94
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 3e-60 93
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 1e-62 93
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 1e-62 93
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 8e-67 93
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 4e-61 93
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-61 92
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-61 92
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-61 92
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 9e-67 92
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 2e-60 92
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 1e-60 91
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 2e-65 90
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 7e-65 89
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 6e-66 89
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 8e-67 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_4281 YP_006146267.1 hypothetical protein VFG0659 Protein 7e-61 94
CE10_4281 YP_006146267.1 hypothetical protein VFG1677 Protein 3e-67 93
CE10_4281 YP_006146267.1 hypothetical protein VFG1527 Protein 4e-67 92
CE10_4281 YP_006146267.1 hypothetical protein VFG1616 Protein 1e-65 90