Gene Information

Name : yfjR (CE10_4274)
Accession : YP_006146260.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Virulence
Product : HTH-type transcriptional regulator yfjR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4349903 - 4350583 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTGATGATCGTTCCCGGCATGATCGTCTGGCGGTTCGCTTATCACTCATTATCAGCCGACTGATGGCCGGAGAATC
TCTGTCACTAAAGACACTGTCAGATGAATTTGGCGTTACAGAACGTACTTTACAGCGCGATTTTCATCAGCGTCTGGTTC
ACCTGGATTTAGAGTACAGAAATGGCAGGTACAGCCTCAGACGACAGAGCAGCCCGTGTGCGATCCCTGAAATGCTTTCT
TTTATACAGAATACCGGGATCGCACGGATACTTCCGCTCCGGAACGGACGACTGATAACCTGTCTTACCGACAACCAGGA
GCCCTCTCCCTGCCTTATCTGGCTGCCGGCGCCGGATATCACTGCAACGTTCCCCGAGTGTTTCTCGCAACTCATCCTGG
CAATAAGACAGTGTATCCACATCTCGCTGATGACTGAGCGATGGTATACGTCACTGGAGCCCTGCCGGCTCATTTATTAC
AGCGGAAGCTGGTATCTGATCGCGTTACAGAAGGGAAAACTGCAGGTCTTTCCCCTGGCAGATATCAAATCAGTCAGCCT
GACATCAGAACGGTTTGAACGGAGAGGCCACATCCACAATCTGGTCGCTGAAGAGCGTTTTATCTCCGCCCTGCCACATT
TCTCTTTCATCCATAAACTTATCAACACCTTTAACCTGTGA

Protein sequence : 
MSDDRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYRNGRYSLRRQSSPCAIPEMLS
FIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDITATFPECFSQLILAIRQCIHISLMTERWYTSLEPCRLIYY
SGSWYLIALQKGKLQVFPLADIKSVSLTSERFERRGHIHNLVAEERFISALPHFSFIHKLINTFNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42094.1 hypothetical protein Not tested PAI II 536 Protein 1e-102 99
APECO1_3492 YP_854319.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 2e-102 98
unnamed CAD33782.1 hypothetical protein Not tested PAI I 536 Protein 5e-102 98
yfjR AAZ04453.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 1e-102 98
c5160 NP_757008.1 transcriptional regulator YfjR Not tested PAI II CFT073 Protein 7e-102 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfjR YP_006146260.1 HTH-type transcriptional regulator yfjR VFG1613 Protein 6e-103 99
yfjR YP_006146260.1 HTH-type transcriptional regulator yfjR VFG1523 Protein 3e-102 98