Gene Information

Name : CE10_4272 (CE10_4272)
Accession : YP_006146258.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Virulence
Product : putative GTPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4348816 - 4349700 bp
Length : 885 bp
Strand : +
Note : -

DNA sequence : 
ATGCCATTCAGCAATTCTTCCCTCTCCGCGCAAGTGAAATCATATCTGACGTTTCTTCCTGAAGAAATTCGCCAGAAAAT
CCTTGAACATCTCCACGGTGTTATTCATTACGAGCCCGTGATTGGCATTATGGGTAAATCCGGCACCGGCAAAAGCAGTC
TGTGTAATGCCATTTTTCAGTCCCGTATCTGCGCCACGCATCCCCTGAACGGCTGCACCCGCCAGGCTCATCGCCTCACC
CTGCAGATTGGTGAACGCAGAATGACGCTGGTCGATCTGCCCGGCATTGGTGAGACACCGCAGCATGATCAGGAATACCG
GGAGCTTTACCGTCAGTTACTGCCGGAACTGGATCTGATTATCTGGATCCTGCGGGCTGATGAACGTGCGTATGCTGCCG
ATATTGCCATGCATCAGTTTTTACTGAATGAAGGTGCAGATCCCTCGCGTTTTCTGTTTGTTCTCAGCCATGCCGATCGC
GTGTTTCCTGCTGAAGAATGGAATGCCACAGAAAAATGCCCATCCCGTCACCAGGAACTCTCACTGGCAACTGTTACAGC
CAGGGTGGCAACCCTGTTCCCGTCATCATTTCCGGTACTCCCCGTTGCTGCGCCTGTCGGCTGGAATCTTCCGGCGTTTG
TGTCGCTGATGATCCACGCCCTGCCACCGCAGGCAACCAGTGCGGTTTATTCACATATCCGGGGGGAAAACCGCTCTGAA
CAGGCCCGGAAACACGCACAACAGACTTTTGGTGACGCCATCGGGAAAAGTTTTGACGACGCCGTTGCCCGGTTCACTTT
TCCGGTCTGGATGTTACAGCTTCTGCGTAAAGCCCGGGACCGCATTATCCGCCTGCTGGAAACACTGTGGGATCGTCTGT
TCTGA

Protein sequence : 
MPFSNSSLSAQVKSYLTFLPEEIRQKILEHLHGVIHYEPVIGIMGKSGTGKSSLCNAIFQSRICATHPLNGCTRQAHRLT
LQIGERRMTLVDLPGIGETPQHDQEYRELYRQLLPELDLIIWILRADERAYAADIAMHQFLLNEGADPSRFLFVLSHADR
VFPAEEWNATEKCPSRHQELSLATVTARVATLFPSSFPVLPVAAPVGWNLPAFVSLMIHALPPQATSAVYSHIRGENRSE
QARKHAQQTFGDAIGKSFDDAVARFTFPVWMLQLLRKARDRIIRLLETLWDRLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33781.1 hypothetical protein Not tested PAI I 536 Protein 2e-135 97
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-134 95
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-134 95
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-134 95
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 6e-133 95
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 5e-134 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_4272 YP_006146258.1 putative GTPase VFG1522 Protein 1e-135 97
CE10_4272 YP_006146258.1 putative GTPase VFG1612 Protein 3e-133 95