Gene Information

Name : CE10_4260 (CE10_4260)
Accession : YP_006146246.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4335837 - 4336409 bp
Length : 573 bp
Strand : -
Note : -

DNA sequence : 
ATGAATGCTATCCCTTATTTCGACTATAGCCTTGCCCCCTTCTGGTCATCTTATCAGAGCAAAGTCATCGGCGTTCTTGA
GCGTGCGCTGCGTGAGCAGTCCGGCTCCCGGATACGACGGATCCTGCTTCGTCTGCCATGTGAATATGACAATACCTTCA
ACAGCAGAACGACCTGGTTTGGTATGGATTTTATCGAAACCGTCAGTGCGCTGATGAATGCGAAACCCGGACGCGACCTT
TGCTGGCTCCTGACCCGTCATCCTGAAAAGCCGGAATACCACGTGGTGCTGTGTGTCAGACAGGAGTATTTCGACGGCCC
TGAACTGGACCGGCTGATTCTGGATGCCTGGAGCAACGTACTGGGCTTCGCGTCACCGGGTGAAGCGGCACCGTACCAGA
AACAGATAACCCGGGATGTGGTGCTGGACAGTCGTTCACCGGACTGCGAAGAGAGACTCAAAGAGTTGATATGGGCGTTC
AGTGATTTCGCCCGCGATCGTCGTGGTGTGCACAATCCGGAAGCCCGTTGCCTCGCTGGTAATCCCTGGTATCCCGTAGC
AGGCCAGCTCTGA

Protein sequence : 
MNAIPYFDYSLAPFWSSYQSKVIGVLERALREQSGSRIRRILLRLPCEYDNTFNSRTTWFGMDFIETVSALMNAKPGRDL
CWLLTRHPEKPEYHVVLCVRQEYFDGPELDRLILDAWSNVLGFASPGEAAPYQKQITRDVVLDSRSPDCEERLKELIWAF
SDFARDRRGVHNPEARCLAGNPWYPVAGQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33738.1 hypothetical protein Not tested PAI I 536 Protein 9e-78 96
unnamed CAD42061.1 hypothetical protein Not tested PAI II 536 Protein 8e-69 93
APECO1_3515 YP_854260.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-69 91
ORF_19 AAZ04429.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-69 91
c5193 NP_757041.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-75 90
unnamed AAL67421.1 unknown Not tested PAI II CFT073 Protein 2e-59 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_4260 YP_006146246.1 hypothetical protein VFG1479 Protein 4e-78 96
CE10_4260 YP_006146246.1 hypothetical protein VFG1580 Protein 3e-69 93