Gene Information

Name : CE10_4254 (CE10_4254)
Accession : YP_006146241.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Virulence
Product : putative multidrug resistance protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4330434 - 4330763 bp
Length : 330 bp
Strand : +
Note : -

DNA sequence : 
ATGTTTAATATTGGATTTTTATGGCTGGCACTTTCCATCGGTTCTGAAATAACCGGTACGTCAATGATCAAAAAAACCAA
TGGTTTTAGGCGACTGTGGCCTTCTGTTCTGGTGGTATGTGCTTATTCAACGTGTTATTTCGCTCTGACCAGAGCAATGA
GTACTATTCCGGTTGGTGTTGCCTATTCACTCTGGTGCGGCTTTGGGATTGTTGGCGTGACAATTTTCTCGATGATTCTT
TATAAACAAAAGCCCGATTTACCTGCCATATTCTCCATGTTGCTGATTATTAGTGGCGGCATTATTATGAATGTATTTTC
AAACATGTAA

Protein sequence : 
MFNIGFLWLALSIGSEITGTSMIKKTNGFRRLWPSVLVVCAYSTCYFALTRAMSTIPVGVAYSLWCGFGIVGVTIFSMIL
YKQKPDLPAIFSMLLIISGGIIMNVFSNM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 9e-46 100
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 1e-15 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_4254 YP_006146241.1 putative multidrug resistance protein CP004022.1.gene1549. Protein 2e-17 44
CE10_4254 YP_006146241.1 putative multidrug resistance protein BAC0324 Protein 1e-12 44
CE10_4254 YP_006146241.1 putative multidrug resistance protein BAC0377 Protein 1e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_4254 YP_006146241.1 putative multidrug resistance protein VFG1586 Protein 4e-46 100
CE10_4254 YP_006146241.1 putative multidrug resistance protein VFG1587 Protein 6e-16 44