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Name : CE10_4228 (CE10_4228) Accession : YP_006146217.1 Strain : Escherichia coli CE10 Genome accession: NC_017646 Putative virulence/resistance : Virulence Product : SHI-2 pathogenicity island protein Function : - COG functional category : - COG ID : - EC number : - Position : 4305465 - 4306508 bp Length : 1044 bp Strand : + Note : - DNA sequence : ATGAACGATAGATTATGCTTTGAAGTGCACGATAACAAGGGTTATTTCGTATTTCCGGATACCTGGTTTGGCCCATTGCT GGGGGAGTTTGAAGAAGTGCTTGATGCATACGACGCTGATGAAATCAGCGAGACGAGTTACATCAACAAACTCCGACGCC TTGCTCAACGGGAGCCGGACTTTATTGATATACACGCTCATCTGGCATATGCATTTCTGGAACAGAATGCCCCGCGTAAG GCACTGAACGCCGCTCTTAAAGGACTGGCGGCAGGTAATCGTATCATCCCGGAAAGTTTCTGTGGTGAAATAATCTGGAT GCATCCCGAAAACCGGCCTTATCTACGCGCGCTTTATGCAGCAATTCTCGCAAATGTGCACTTACAGCGCCATCAGGATG CGGTTATGCTCACTGATAAAATACTGGCATACAATCCTGAAGATAATCAGGGGGCTCGCTGGTTGTTGGGTTCAGAGCTG TTACGCACCGGCGATCATGAGCGAGCCTTCAGTGTACTGAAAGAGCATGCTGATGAATTTTCACCTTACTGGTATGAACT CGGTCTCCTGCATTTTCTGAACGGGGAACATGTTAAGGCCGCCACAGCTTTTCGCCATGGCTTTGCCACAAACACTTACA TCGCAGAAATGCTGTGCGGAAATCTGCATCCATTTCCACTTGCTGTGTGGCATGACTTCTCCGGCTCTCTGGATACGGCA GAAGATTACTATGCAACATACTCACCATTATGGGGACAATATTCGGAAGCATTGCTGTTTGTAAACTGGCTCTATAACCA TTCCTCCGTGCTGCATGAACGATCAGAAATCATTAAATGCGCCGAAATGCTGATTCAGGAAGATGATTTCGAAATATGCG AAAGTATTTTAAGACAGCAGGAGCACCTGTGGAAAAGAATTGACAAGACACTTTCTGAGGAAATTGTACAGAAATGCAGA AATATGAACGGTGAATATATCTGGCCCTGGATATTGCCCTTTTCCGCAGCAGGGATAAAACATTCAAGCATCCAGCATCA GTAG Protein sequence : MNDRLCFEVHDNKGYFVFPDTWFGPLLGEFEEVLDAYDADEISETSYINKLRRLAQREPDFIDIHAHLAYAFLEQNAPRK ALNAALKGLAAGNRIIPESFCGEIIWMHPENRPYLRALYAAILANVHLQRHQDAVMLTDKILAYNPEDNQGARWLLGSEL LRTGDHERAFSVLKEHADEFSPYWYELGLLHFLNGEHVKAATAFRHGFATNTYIAEMLCGNLHPFPLAVWHDFSGSLDTA EDYYATYSPLWGQYSEALLFVNWLYNHSSVLHERSEIIKCAEMLIQEDDFEICESILRQQEHLWKRIDKTLSEEIVQKCR NMNGEYIWPWILPFSAAGIKHSSIQHQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| shiA | AAD44731.1 | ShiA | Virulence | SHI-2 | Protein | 2e-153 | 99 |
| shiA | NP_839237.1 | hypothetical protein | Virulence | SHI-2 | Protein | 3e-153 | 99 |
| shiA | NP_709438.1 | hypothetical protein | Virulence | SHI-2 | Protein | 3e-153 | 99 |
| aec34 | AAW51717.1 | Aec34 | Not tested | AGI-3 | Protein | 2e-149 | 96 |
| shiA | AFX83956.1 | ShiA family protein | Not tested | SE-PAI | Protein | 5e-136 | 87 |
| c3557 | NP_755432.1 | ShiA-like protein | Not tested | PAI I CFT073 | Protein | 3e-132 | 83 |
| ECUMN_3323 | YP_002414005.1 | SHI-2 pathogenicity island protein | Virulence | Not named | Protein | 2e-133 | 83 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CE10_4228 | YP_006146217.1 | SHI-2 pathogenicity island protein | VFG0599 | Protein | 1e-153 | 99 |
| CE10_4228 | YP_006146217.1 | SHI-2 pathogenicity island protein | VFG1694 | Protein | 1e-132 | 83 |
