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Name : gspF (CE10_3492) Accession : YP_006145500.1 Strain : Escherichia coli CE10 Genome accession: NC_017646 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 3555765 - 3556988 bp Length : 1224 bp Strand : - Note : - DNA sequence : ATGGCACTGTTTTACTATCAGGCGCTGGAGCGTAATGGTCGCAAAACCAAAGGAATGATTGAGGCGGATTCCGCGCGTCA TGCCCGTCAATTGTTGCGTGGTAAAGAGCTTATCCCCGTGCACATTGAAGCCCGGCTGAATGCTTCGACAGGGGGAATGT TGCAGCGTCGGCGGCATGCACATCGTCGCGTGGCGGCGGCAGATTTGGCGCTGTTCACACGCCAACTGGCAACGCTGGTG CAGGCAGCAATGCCGCTGGAAACCTGCTTACAGGCGGTCAGTGAGCAAAGTGAAAAACTGCATGTAAAAAGCCTCGGAAT GGCGCTGCGCAGCCGGATTCAGGAAGGTTATACCCTGTCGGACAGCCTGCGCGAACATCCCCGCGTCTTTGACTCCCTGT TTTGTTCGATGGTCGCTGCCGGAGAAAAATCCGGACATCTCGACGTGGTGCTCAATCGCCTGGCGGATTACACCGAACAG CGGCAGCATCTGAAATCACGCCTGCTGCAGGCCATGCTCTACCCGCTGGTACTGCTGGTGGTGGCAACGGGCGTGGTCAC TATTTTGCTGACGGCAGTAGTGCCGAAAATTATCGAACAGTTTGATCATCTCGGACACGCGCTGCCTGCCTCCACCCGAA TGCTCATCGCCATGAGCGACACGTTACAGACCAGCGGCGTGTACTGGCTGGCGGGTTTGCTGGGGCTTCTGGTGCTGGGG CAACGGCTACTCAAAAATCCTGCGATGCGCCTGCGCTGGGATAAAACCTTGCTGCGTTTGCCCGTGACGGGGCGTGTTGC GCGCGGACTGAATACGGCGCGTTTTTCCCGCACATTAAGCATCCTCACCGCCAGCAGTGTTCCGCTGCTGGAAGGCATTC AGACCGCCGCCGCCGTGTCGGCAAATCGTTATGTCGAGCAACAACTGCTGCTAGCGGCAGATCGCGTCCGCGAAGGAAGC AGCCTGCGCGCCGCGCTGGCGGAGTTGCGCCTGTTCCCGCCGATGATGCTGTACATGATCGCCTCCGGCGAACAGAGCGG TGAACTGGAAACCATGCTTGAACAGGCCGCGGTCAACCAGGAACGGGAATTTGATACCCAGGTGGGGCTGGCGTTAGGGC TGTTTGAGCCGGCGCTGGTGGTGATGATGGCGGGCGTGGTGCTGTTTATCGTCATCGCCATCCTCGAACCGATGCTGCAA CTGAACAATATGGTTGGAATGTAA Protein sequence : MALFYYQALERNGRKTKGMIEADSARHARQLLRGKELIPVHIEARLNASTGGMLQRRRHAHRRVAAADLALFTRQLATLV QAAMPLETCLQAVSEQSEKLHVKSLGMALRSRIQEGYTLSDSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQ RQHLKSRLLQAMLYPLVLLVVATGVVTILLTAVVPKIIEQFDHLGHALPASTRMLIAMSDTLQTSGVYWLAGLLGLLVLG QRLLKNPAMRLRWDKTLLRLPVTGRVARGLNTARFSRTLSILTASSVPLLEGIQTAAAVSANRYVEQQLLLAADRVREGS SLRAALAELRLFPPMMLYMIASGEQSGELETMLEQAAVNQEREFDTQVGLALGLFEPALVVMMAGVVLFIVIAILEPMLQ LNNMVGM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-154 | 99 |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-154 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF | YP_006145500.1 | general secretion pathway protein F | VFG2049 | Protein | 5e-147 | 97 |
| gspF | YP_006145500.1 | general secretion pathway protein F | VFG0181 | Protein | 6e-69 | 47 |
