Gene Information

Name : gspI (CE10_3489)
Accession : YP_006145497.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Virulence
Product : general secretion pathway protein I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3554358 - 3554729 bp
Length : 372 bp
Strand : -
Note : -

DNA sequence :
ATGAAGCGTGGATTTACCTTGCTGGAAGTAATGCTCGCGCTGGCGATTTTTGCGTTGGCCGCCATGGCGGTGTTACAGAT
CGCCAGCGGCGCGCTGAGTAATCAGCAAATCCTTGAAGAAAAAACGGTAGCGGGCTGGGTAGCTGAAAACCAGACCGCAC
TGCTTTACCTGATGACCCGTGAACAACGAGCGGTCAGGCACCAGGGCGAGAGTGATATGGCAGGAAGCCGCTGGTACTGG
CGAACCACACCGCTGAGTACAGGCAACGCGCTGCTCCAGGCAGTGGATATTGAAGTCAGCCGTCACGAAGACTTTTCGTC
GGTGATTCAGTCACGACGCGCCTGGTTTAGCGCCGTGGGAGGCCAACAGTGA

Protein sequence :
MKRGFTLLEVMLALAIFALAAMAVLQIASGALSNQQILEEKTVAGWVAENQTALLYLMTREQRAVRHQGESDMAGSRWYW
RTTPLSTGNALLQAVDIEVSRHEDFSSVIQSRRAWFSAVGGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 8e-42 99
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 6e-40 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspI YP_006145497.1 general secretion pathway protein I VFG2052 Protein 6e-42 95