Gene Information

Name : gspJ (CE10_3488)
Accession : YP_006145496.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Virulence
Product : general secretion pathway protein J
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3553756 - 3554361 bp
Length : 606 bp
Strand : -
Note : -

DNA sequence :
GTGAGAAGGACTTGCGCTGGTTTCACGTTACTGGAAATGCTGGTGGCAATTGCCATTTTTGCCTCACTGGCACTGATGGC
GCTGCAGGTGACAAACGGCGTTACACGCGTGAATAGCGCCGTCGCCGGACACGATCAAAAACTAAACCTCATGCAGCAAA
CGATGAGTTTTTTGAACCACGATCTGACACAAATGATGCCGCGTCCGGTAAGAGGCGATCAGGGCCAGCGTGAACCAGCG
TTACTGGCGGGCGCTGGCGTGCTGGCGTCTGAGAGTGAAGGGATGCGTTTTGTGCGCGGCGGCGTGGTTAATCCGTTGAT
GCGTCTGCCGCGCAGTAATCTGCTCACCGTCGGTTACCGCATTCATGGTGGTTATCTCGAACGGTTAGCCTGGCCACTGA
CCGATGCGGCAGGCAGCGTGAAGCCAACAACGCAAAAATTAATCCCGGCGGATTCGCTCCGTTTGCAGTTCTACGACGGC
ACGCGCTGGCAGGAGAGCTGGTCATCAGTGCAGGCGATTCCTGTGGCAGTACGCATAACCCTGCATTCGCCGCAATGGGG
CGAAATTGAACGCATCTGGTTGTTACGCGGGCCGCAATTATCATGA

Protein sequence :
MRRTCAGFTLLEMLVAIAIFASLALMALQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLNHDLTQMMPRPVRGDQGQREPA
LLAGAGVLASESEGMRFVRGGVVNPLMRLPRSNLLTVGYRIHGGYLERLAWPLTDAAGSVKPTTQKLIPADSLRLQFYDG
TRWQESWSSVQAIPVAVRITLHSPQWGEIERIWLLRGPQLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspJ CAE85228.1 GspJ, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-84 99
gspJ YP_854401.1 type II secretion protein GspJ Not tested PAI I APEC-O1 Protein 5e-88 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspJ YP_006145496.1 general secretion pathway protein J VFG2053 Protein 4e-83 97