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Name : kpsC (CE10_3475) Accession : YP_006145484.1 Strain : Escherichia coli CE10 Genome accession: NC_017646 Putative virulence/resistance : Virulence Product : capsule polysaccharide export protein Function : - COG functional category : - COG ID : - EC number : - Position : 3538664 - 3540691 bp Length : 2028 bp Strand : + Note : - DNA sequence : ATGATTGGCATTTACTCGCCTGGCATCTGGCGTATTCCGCATCTGGAGAAATTTCTGGCGCAACCGTGCCAGAAACTTTC TCTGCTGCGCCCTGTTCCGCAAGAAGTTGATGCTATCGCCGTGTGGGGACATCGTCCCAGCGCGGCGAAACCAGTCGCCA TCGCCAAAGCAGCGGGAAAACCCGTCATTCGTCTGGAAGATGGATTTGTGCGTTCGCTGGATCTTGGCGTCAATGGCGAG CCGCCGCTTTCTCTGGTGGTGGATGATTGTGGCATTTACTACGATGCCAGCAAGCCTTCAGCACTGGAGAAACTGGTACA GGATAAAGCCGGAAATACAGCTCTGATAAGCCAGGCCAGAGAAGCGATGCACACCATCGTGACCGGGGATTTGTCGAAAT ATAACCTGGCACCTGCGTTTGTGGCTGATGAGTCAGAACGTGCAGACATCGTTCTGGTTGTCGATCAGACATTTAATGAT ATGTCAGTGACGTATGGCAATGCTGGCCCGCATGAGTTTGCTGCCATGCTGGAAGCCGCGATGGCGGAAAATCCTCAAGC CGAAATTTGGGTGAAGGTGCACCCAGATGTACTGGAAGGAAAGAAAACAGGTTATTTCGCTGATCTGCGTGCCACGCAAC GAGTACGTTTGATTGCCGAGAATGTCAGCCCGCAGTCGCTATTGCGACACGTTTCCCAGGTTTACGTCGTGACCTCCCAG TACGGCTTTGAAGCCTTGCTGGCAGGAAAACCAGTAACATGTTTCGGCCAGCCTTGGTATGCAGGTTGGGGTTTAACCGA CGATCGTCATCCACAGTCCGCTTTGTTATCTGCCCGACGCGGTTCTGCCACGCTGGAGGAACTTTTTGCCGCTGCATACC TGCGTTACTGTCGCTATATCGATCCGCAAACGGGAGAAGTAAGCGATCTATTTACCGTGCTGCAATGGCTGCAATTACAA CGTCGACATCTGCAACAGCGTGATGGTTATTTATGGGCGCCAGGCTTAACGCTGTGGAAGTCAGCGATCCTGAAACCTTT CTTGCAAACGGCAACAAACCGGCTGAGTTTTTCACGTCGCTGTACTGCGGCGAGCGCCTGCGTGGTATGGGGTGTAAAGG GAGAACAGCAATGGCGAGCCGAAGCGCAGCGAAAATCACTGCCGTTATGGCGAATGGAAGATGGTTTTCTGCGTTCATCC GGACTTGGCTCTGACCTGCTGCCGCCGCTATCGCTGGTGCTGGATAAACGCGGTATTTACTATGACGCCACACGCCCCAG CGATCTGGAAGTGCTGCTGAATCATAGCCAGCTAACGCTGGCGCAGAAGATGCGAGCTGAAAAATTACGCCAGCGACTGG TTGAAAGCAAACTGAGTAAGTACAACCTGGGAGCCGATTTCTCTCTACCAGCCGAAGCCAAAGATAAAAAAGTTATCCTG GTGCCGGGTCAGGTAGAGGACGATGCCTCTATTAAAACAGGCACTGTCTCGATTAAGAGCAACCTTGAGTTATTACGCAC AGTACGCGAGCGCAATCCGCACGCCTACATTGTTTATAAACCGCACCCGGATGTACTGGTGGGGAATCGCAAGGGCGATA TTCCGGCAGAACTGACTGCTGAACTCGCTGATTATCAGGCACTGGACGCCGATATTATTCAATGCATTCAGCGCGCAGAT GAAGTGCACACCATGACATCATTGTCCGGGTTTGAAGCGTTATTACATGGCAAGCACGTACATTGTTACGGCCTGCCCTT CTATTCCGGTTGGGGTTTAACCGTCGATGAACATCGCTGCCCGCGTCGCGAGCGAAAATTAACGTTAGCGGATTTGATCT ATCAGGCGCTGATTGTTTATCCAACCTATATCCACCCAACACGGCTACAACCTATTACGGTTGAAGAGGCGGCGGAATAT TTGATCCAGACGCCGCGCAAGCCGTTGTTTATTACCAGAAAAAAAGCGGGGCGAGTAATACGTTATTACCGCAAATTAAT TATGTTCTGCAAGGTCAGATTTGGCTAA Protein sequence : MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGE PPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDLSKYNLAPAFVADESERADIVLVVDQTFND MSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSQVYVVTSQ YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQ RRHLQQRDGYLWAPGLTLWKSAILKPFLQTATNRLSFSRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSS GLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQKMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKVIL VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRAD EVHTMTSLSGFEALLHGKHVHCYGLPFYSGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEY LIQTPRKPLFITRKKAGRVIRYYRKLIMFCKVRFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 0.0 | 99 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 0.0 | 99 |
| kpsC | CAE85214.1 | KpsC protein | Virulence | PAI V 536 | Protein | 5e-176 | 93 |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 2e-127 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| kpsC | YP_006145484.1 | capsule polysaccharide export protein | VFG0259 | Protein | 9e-128 | 50 |
| kpsC | YP_006145484.1 | capsule polysaccharide export protein | VFG0692 | Protein | 6e-118 | 48 |
| kpsC | YP_006145484.1 | capsule polysaccharide export protein | VFG0704 | Protein | 3e-105 | 48 |
