Gene Information

Name : CE10_3454 (CE10_3454)
Accession : YP_006145463.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Unknown
Product : putative transposase A, IS30D
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3521827 - 3522195 bp
Length : 369 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCAGAAAAACCCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCTCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAG
CGAGATATATTAAAAAAAGCAACTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTT
TTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGA

Protein sequence : 
MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLE
RDILKKATVDSIGQRNSYVKTWGCGGFLNETNIYSRGKSLCF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 6e-34 99
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 6e-34 99
unnamed AAF09021.1 unknown Not tested SHI-O Protein 2e-33 98
unnamed AAF09029.1 unknown Not tested SHI-O Protein 2e-33 98
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 9e-34 98
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-33 98
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 2e-34 98
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 2e-34 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_3454 YP_006145463.1 putative transposase A, IS30D VFG1707 Protein 4e-34 98