Gene Information

Name : CE10_3432 (CE10_3432)
Accession : YP_006145445.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Unknown
Product : putative transposase B, IS3411
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3498658 - 3499356 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence :
GTGTACGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACGGGAAGGAATCAGGGTGGCCAGATGTACAGTGGCGCGCCTCAT
GGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGCACTACCGTCAGCCGGAAAACCGTTGCTGCAGGTG
ACCGCGTAAACCGTCAGTTCGTGGCAGAACGTCCTGACCAGCTGTGGGTGGCTGATTTTACTTACGTCAGCACATGGCAG
GGCTTCGTCTATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATCGTGGGGTGGTGGGTCTCATCGTCTATGGAAAC
GACATTCGTGCTGGATGCGCTGGAGCAGGCGTTATGGGCCCGTCGACCGTCCGGCACGGTCCATCACAGTGATAAAGGTT
CTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCG
TATGACAACGCGATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGCTGGAAAAACCGTGC
AGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCATACTCCTC
CGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAACGATGATCTGGCAGCCTGA

Protein sequence :
MYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTVSRKTVAAGDRVNRQFVAERPDQLWVADFTYVSTWQ
GFVYVAFIIDVFAGYIVGWWVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDS
YDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 2e-88 98
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 2e-101 98
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 6e-99 98
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 6e-99 98
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 6e-99 98
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 8e-102 98
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 7e-102 98
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 5e-102 98
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 2e-92 97
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 8e-93 97
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 3e-101 97
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 2e-101 97
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 3e-98 97
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-101 97
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-101 97
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 1e-96 96
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 4e-99 96
Z1221 NP_286756.1 transposase Not tested TAI Protein 3e-99 96
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 2e-71 95
Z1198 NP_286733.1 transposase Not tested TAI Protein 1e-98 95
Z1638 NP_287141.1 transposase Not tested TAI Protein 1e-98 95
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 7e-99 95
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 3e-31 51
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 2e-45 49
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 5e-28 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_3432 YP_006145445.1 putative transposase B, IS3411 VFG1715 Protein 7e-72 95
CE10_3432 YP_006145445.1 putative transposase B, IS3411 VFG1602 Protein 4e-99 95