Gene Information

Name : CE10_3428 (CE10_3428)
Accession : YP_006145441.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Unknown
Product : putative transposase, IS1A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3495943 - 3496446 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence : 
ATGCCGGGCAACTGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGGCGAACAGTGGGGCTATGTCGGGGCTAAAT
CGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACGATG
GCGACGCTGGGGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTGGCCGCTGTATGA
ATCACGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGC
AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTAT
CTGAACATAAAACACTATCAATAA

Protein sequence : 
MPGNCPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMGEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTM
ATLGRLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 6e-74 96
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 4e-73 95
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 4e-73 95
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 4e-74 95
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 4e-74 95
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 4e-74 95
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 1e-55 94
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 1e-71 94
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 2e-72 93
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 1e-72 93
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 1e-57 93
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 9e-71 92

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_3428 YP_006145441.1 putative transposase, IS1A VFG0612 Protein 3e-71 92