Gene Information

Name : papE1 (CE10_3427)
Accession : YP_006145440.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Virulence
Product : fimbrial tip protein PapE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3495367 - 3495888 bp
Length : 522 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAGATAAGAGGTTTGTGTCTTCCGGTAATGCTGGGGGCAGTGTTAATGTCTCAGCATGTACATGCAGCTGATAA
TCTGACCTTTAAAGGAAAACTGATTATTCCTGCCTGTACTGTACAAAATGCTGAAGTTAACAGGGGTGATATTGAAATTC
AGAAGCTGGTACAGAGTGGCGGAAATCAGAAAGACTTTACTGTCCAGATGACCTGTCCTTATCATTTGGGAACAATGAAG
GTTACGATAACGGCAACAAACACTTATAACAATGCTATTTTAGTTCAGAATACATCAAACACATCTTCTGATGGGTTACT
TGTTTATCTTTATAGCAGTAATGCAGGAAATATTGGGACTGCGATAACTTTAGGGACTCCATTTACGCCCGGAAAAATCA
CAGGTAATAATGCAGATAGAACTATATCACTTCATGCCAAACTTGGATATAAAGGGAATATGCAGAGTCTGAAGGCTGGG
GATTTTTCTGCGACAGCAACGCTGGTTGCATCATATTCGTAA

Protein sequence : 
MKKIRGLCLPVMLGAVLMSQHVHAADNLTFKGKLIIPACTVQNAEVNRGDIEIQKLVQSGGNQKDFTVQMTCPYHLGTMK
VTITATNTYNNAILVQNTSNTSSDGLLVYLYSSNAGNIGTAITLGTPFTPGKITGNNADRTISLHAKLGYKGNMQSLKAG
DFSATATLVASYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papE NP_755460.1 PapE protein Virulence PAI I CFT073 Protein 2e-66 91
papE_2 NP_757029.1 PapE protein Virulence PAI II CFT073 Protein 2e-66 91
papE YP_854250.1 PapE protein Virulence PAI I APEC-O1 Protein 2e-63 87
papE AAZ04420.1 P pilus tip protein Virulence PAI I APEC-O1 Protein 1e-63 87
prfE CAD42025.1 PrfE protein Virulence PAI II 536 Protein 2e-62 79
prsE YP_002414011.1 Fimbrial protein Not tested Not named Protein 1e-57 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papE1 YP_006145440.1 fimbrial tip protein PapE VFG0899 Protein 5e-67 91
papE1 YP_006145440.1 fimbrial tip protein PapE VFG0888 Protein 5e-67 91
papE1 YP_006145440.1 fimbrial tip protein PapE VFG1544 Protein 6e-63 79