Gene Information

Name : CE10_3420 (CE10_3420)
Accession : YP_006145433.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Unknown
Product : putative transposase, IS1A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3490748 - 3491251 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence :
ATGCCGGGCAACTGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGGCGAACAGTGGGGCTATGTCGGGGCTAAAT
CGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACGATG
GCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGA
ATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAAACTGAATCTGAGGC
AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTAT
CTGAACATAAAACACTATCAATAA

Protein sequence :
MPGNCPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMGEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTM
ATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHKLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
LNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 8e-75 97
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 8e-75 97
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 8e-75 97
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 3e-72 96
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 3e-73 93
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 1e-72 92
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 1e-72 92
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 3e-55 91
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 4e-72 90
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 6e-72 90
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 3e-70 89
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 4e-57 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_3420 YP_006145433.1 putative transposase, IS1A VFG0612 Protein 8e-71 89