Gene Information

Name : epaR (CE10_3290)
Accession : YP_006145307.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Virulence
Product : type III secretion protein EpaR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3354640 - 3355407 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence : 
ATGGGGGAGGCGATACTCTATCAGTTGCATAGTCTGCTGGCTGCTACAGCGCTCGGTTTTTGCCGATTGGCACCAACTTT
CTATTTGTTACCATTTTTCGCCAGTGGGAATATACCAACAGTAGTTCGTCACCCAATAATAATAGTGGTATCATGTGCAT
TAGTTCAGCATTACCACTATGAATTATCGACCTTAAATGAAATAGATATCGCTTTGTTAGCTGCCAGAGAAATTATCATA
GGGTTGTTTATTGCTTGCTTATTAGCATCCCCATTTTGGATTTTCCTTGCTATAGGCAGCTTTATCGATAACCAACGTGG
TGCAACGTTAAGTAGTACTTTGGATCCGGCTACAGGTGTCGATACATCGGAATTAGCAAGATTATTTAACCTTTTCTCTG
CAGCAGTTTATCTTACTAACGGTGGATTGAACTTTATTCTGGAGACTCTATGGCAAAGTTATAACTTATGGCCTTCAGGA
AATTTTAATTTTCCTAAATTAGAGCCTTTATTCTCATATATTAATAATATAATGACTCATACTATCGTTTACGCAAGCCC
CGTGATTGCGGTTATGCTGGGCGGTGAAGCTGTCCTGGGATTGTTGGCACGCTATGCTTCACAACTAAATGCTTTTGCCA
TCTCACTGACTGTCAAAAGTGCGCTGGCATTTTTAATATTAATTATTTATTTTGGCCCAATACTGGCTGAACGAGTTATG
CCGTTATCCTTTTTCCCAGAACAATTGCAATTATACATTGATAAATAG

Protein sequence : 
MGEAILYQLHSLLAATALGFCRLAPTFYLLPFFASGNIPTVVRHPIIIVVSCALVQHYHYELSTLNEIDIALLAAREIII
GLFIACLLASPFWIFLAIGSFIDNQRGATLSSTLDPATGVDTSELARLFNLFSAAVYLTNGGLNFILETLWQSYNLWPSG
NFNFPKLEPLFSYINNIMTHTIVYASPVIAVMLGGEAVLGLLARYASQLNAFAISLTVKSALAFLILIIYFGPILAERVM
PLSFFPEQLQLYIDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epaR AAZ31291.1 EpaR Virulence ETT2 Protein 5e-82 98
spaR NP_457282.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 3e-41 48
spaR NP_806491.1 virulence-associated secretory protein Virulence SPI-1 Protein 3e-41 48
spaR NP_461809.1 needle complex export protein Virulence SPI-1 Protein 1e-41 48
spaR YP_217807.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 4e-40 47
spaR AAS66867.1 SpaR Not tested SSR-2 Protein 6e-31 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
epaR YP_006145307.1 type III secretion protein EpaR VFG0549 Protein 6e-42 48
epaR YP_006145307.1 type III secretion protein EpaR VFG1014 Protein 1e-36 43