Gene Information

Name : eprK (CE10_3284)
Accession : YP_006145302.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Virulence
Product : putative type III secretion system lipoprotein EprK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3349101 - 3349835 bp
Length : 735 bp
Strand : -
Note : -

DNA sequence :
ATGAAATATATATCATTATTCTTGTTTATCCTGCTGTTGTGCGGTTGCAAGCAGCAGGAATTACTGAACCATCTTGATCA
ACAGCAAGCTAATGATGTCCTTGCTGTTTTACAAAGACATAATATTAATGCTGAGAAGAAGGATCAAGGCAAAATTGGAT
TTTCAATCTATGTAGAACCAACGGATTTTGCTTCTGCGGTGGATTGGCTAAAAATCTACAATCTCCCGGGTAAGCCTGAT
ATTCAAATATCGCAGATGTTCCCTGCAGATGCACTCGTTTCCTCTCCACGAGCGGAAAAAGCAAGATTGTATTCTGCTAT
TGAACAGCGTTTAGAGCAATCTCTCAAAATTATGGATGGCATTGTTTCTTCAAGAGTACATGTTAGTTACGATGTTGATA
CAGGTGATAGTGGCAAAACTGCTTTACCAATTCATATTTCTGTACTTGCTGTATATGAAAAAGATATCAATCCAGAAATA
AAAATAAATGACATTAAGAGATTTATTGTTAATAGCTTTGCAAGCGTACAATATGAGAATATTTCAGTCGTATTGTCAAA
ACGAAGAGATATTATTGAACAAGCACCAACATATGAAATTAACGAACCTATTTTTGCTTATGATAAGACTATGCCGGTTT
CTATCTTACTTGCATTAATGTCCATTGCGACTTGCTGGCTGTTATGGAAGTACAGGGCTATTCTAACTAATTTAATCAGG
TTAAAAAATAAGTAG

Protein sequence :
MKYISLFLFILLLCGCKQQELLNHLDQQQANDVLAVLQRHNINAEKKDQGKIGFSIYVEPTDFASAVDWLKIYNLPGKPD
IQISQMFPADALVSSPRAEKARLYSAIEQRLEQSLKIMDGIVSSRVHVSYDVDTGDSGKTALPIHISVLAVYEKDINPEI
KINDIKRFIVNSFASVQYENISVVLSKRRDIIEQAPTYEINEPIFAYDKTMPVSILLALMSIATCWLLWKYRAILTNLIR
LKNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs3716 NP_311743.1 EprK Not tested LIM Protein 5e-104 97
eprK AAZ31284.1 EprK Virulence ETT2 Protein 1e-102 95
prgK YP_217790.1 cell invasion protein Virulence SPI-1 Protein 4e-58 56
prgK NP_461792.1 needle complex inner membrane lipoprotein Virulence SPI-1 Protein 4e-58 56
prgK AAS66872.1 PrgK Virulence SSR-2 Protein 7e-53 56
prgK NP_806474.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 5e-59 55
prgK NP_457265.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 5e-59 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
eprK YP_006145302.1 putative type III secretion system lipoprotein EprK VFG0533 Protein 2e-58 56
eprK YP_006145302.1 putative type III secretion system lipoprotein EprK VFG0998 Protein 1e-43 45
eprK YP_006145302.1 putative type III secretion system lipoprotein EprK VFG1787 Protein 6e-39 43