Gene Information

Name : CE10_3140 (CE10_3140)
Accession : YP_006145162.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Unknown
Product : putative transposase B, IS1397
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3197280 - 3197894 bp
Length : 615 bp
Strand : -
Note : -

DNA sequence :
GTGCGAAAACTGATGCAACAGCTCGGCCTGAAGTCTCCTGTGCGCCTGAAGAAATACCGGTCTTACCGGGGAAATATGGG
ACTCGCTGCAGAAAATATCCTTCAGCGGCAGTTCAAAGCGGAAGCTCCCTGTGAGAAATGGGTGACAGATATCACCGAAT
TCAGGGCTGGCGGACAAAAACTGTACCTGTCCCCGATACTTGATTTGTTTAACGGGGAAATCGTGGCGTGGGAAACTGCC
TGCAGGCCTACAGAGGAGCTGGTGAAGCGCATGTTAAATAAGGGGCTGGAAAGCCTTGCAGAAGGAGAAAAACCGCTGCT
CCACAGTGATCAAGGGTGGCATTACCGGATAAAAAGTTATCAGTCTGCCCTGGCAGACAAAGGGTTAGTGCAGAGCATGT
CGCGCAAGGGCAACTGTCTTGATAATGCGGTAATGGAGAATTTCTTTGGTCACCTGAAAGAAGAAATGTACTATCGCCGG
GACTACAGAAGTGTAGAAGAGCTGGAAAATGCCGTTAACGAATACATAACTTACTGGAATCAAAAAAGAATAAAACTCAG
TCTTGGGGGACTCAGCCCGGTAGAATACCGGACTGAGTATCAAAAAGCCGGTTAA

Protein sequence :
MRKLMQQLGLKSPVRLKKYRSYRGNMGLAAENILQRQFKAEAPCEKWVTDITEFRAGGQKLYLSPILDLFNGEIVAWETA
CRPTEELVKRMLNKGLESLAEGEKPLLHSDQGWHYRIKSYQSALADKGLVQSMSRKGNCLDNAVMENFFGHLKEEMYYRR
DYRSVEELENAVNEYITYWNQKRIKLSLGGLSPVEYRTEYQKAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 3e-53 53
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 4e-55 53
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 5e-41 49
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 5e-41 49
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 5e-41 47
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 4e-41 47
CDC7B_2064 YP_005163505.1 transposase-like protein Not tested Not named Protein 5e-25 46
SE0101 NP_763656.1 transposase Not tested SCCpbp4 Protein 6e-22 43
CD241_0051 YP_005124320.1 transposase-like protein Not tested Not named Protein 2e-31 42
tnp BAG06206.2 transposase for ISSau4-like Not tested Type-VII SCCmec Protein 6e-22 41