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Name : gabD (CE10_3079) Accession : YP_006145106.1 Strain : Escherichia coli CE10 Genome accession: NC_017646 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I, NADP-dependent Function : - COG functional category : - COG ID : - EC number : - Position : 3143230 - 3144678 bp Length : 1449 bp Strand : + Note : - DNA sequence : ATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTAATTAACGGGGAGTGGCTGGACGCCAACAATGGCGAAGT CATCGAGGTCACTAATCCGGCAAACGGCGACAAGCTGGGTAGCGTACCCAAAATGGGCGCAGATGAAACCCGCGCCGCTA TCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGTGCGCTCACCGCCAAAGAACGCGCCAACATTCTGCGCAACTGGTTC AATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGCAAACCGCTGGCGGAAGCGAAAGG CGAAATCAGCTACGCAGCCTCTTTTATTGAGTGGTTTGCCGAAGAAGGCAAACGTATTTATGGCGATACCATTCCCGGTC ATCAGGCCGACAAACGCCTGATTGTTATCAAACAGCCGATTGGCGTTACCGCCGCCATCACGCCGTGGAACTTCCCGGCG GCGATGATTACCCGTAAAGCCGGTCCGGCGCTGGCGGCAGGCTGCACGATGGTGCTGAAACCTGCCAGTCAGACGCCGTT CTCTGCGCTGGCGCTGGCGGAACTGGCGATTCGCGCAGGCGTTCCGGCTGGCGTATTTAACGTGGTCACCGGTTCGGCGG GCGCGGTCGGTAACGAACTGACCAGCAATCCGCTGGTGCGCAAGCTGTCGTTTACCGGCTCGACCGAAATTGGCCGCCAG TTAATGGAACAGTGCGCGAAAGACATCAAGAAAGTGTCGCTGGAGCTGGGCGGCAACGCGCCGTTTATCGTCTTTGACGA TGCCGACCTCGACAAAGCCGTGGAAGGCGCACTGGCCTCGAAATTCCGCAACGCCGGGCAAACCTGCGTCTGCGCCAACC GTTTATACGTGCAGGACGGCGTGTATGACCGCTTTGCCGAAAAATTGCAGCAGGCGGTGAGCAAACTGCACATCGGCGAC GGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGC CCTGGAGAAAGGCGCGCGCGTGGTTTGCGGTGGTAAAGCACACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGG TGGACGTTCCGGCCAACGCCAAAGTGTCGAAAGAAGAGACGTTCGGCCCCCTCGCCCCGCTGTTCCGCTTTAAAGATGAA GCCGATGTGATTGCGCAAGCCAATGACACCGAGTTTGGTCTTGCCGCCTATTTCTACGCCCGTGATTTAAGCCGCGTCTT CCGCGTGGGCGAAGCGCTGGAGTACGGCATCGTCGGCATCAATACCGGGATAATTTCCAATGAAGTGGCCCCGTTCGGCG GCATTAAAGCCTCGGGTCTGGGTCGTGAAGGTTCGAAGTATGGCATCGAAGATTACTTAGAAATCAAATATATGTGCATC GGTCTTTAA Protein sequence : MKLNDSNLFRQQALINGEWLDANNGEVIEVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRNWF NLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGD GLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-158 | 67 |
