Gene Information

Name : CE10_2735 (CE10_2735)
Accession : YP_006144782.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Unknown
Product : CPS-53 (KpLE1) prophage prophage CPS-53 integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2780622 - 2781779 bp
Length : 1158 bp
Strand : +
Note : -

DNA sequence :
ATGCTCACCGTTAAGCAGATTGAAGCAGCAAAGCCGAAAGAAAAACCATACCGCCTACTCGATGGTAATGGCCTGTACCT
TTATGTCCCTGTGTCAGGGAAAAAGGTATGGCAGCTTCGCTACAAGATTGACGGTAAGGAGAAAATCCTGACCGTAGGAA
AATATCCGCTAATGACTTTGCAGGAGGCAAGAGATAAAGCATGGACCGCGAGGAAAGACATCTCGGTTGGCATCGATCCG
GTAAAAGCGAAAAAGGCTTCGTCTAACAACAATTCCTTTAGCGCCATTTACAAGGAATGGTACGAGCACAAGAAGCAAGT
CTGGTCAGTAGGCTATGCAACTGAACTTGCCAAAATGTTTGATGACGACATTTTGCCCATCATCGGCGGTCTTGAGATTC
AGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGATTTGAAGATCGCGGTGCAATGGAACGAGCCAATAAAGCC
CGCAGAAGATGCGGCGAGGTTTTTCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCAGA
CGCCATGAAAGGATACCGCAAGAAGAACTTCCCGTTTCTTCCAGCAGACCAGATCCCTGCATTCAACAAAGCACTGGCAA
CATTTTCAGGAAGTATCGTATCGCTCATTGCGACCAAAGTCTTACGCTACACAGCCCTAAGAACGAAAGAGCTTCGTTCC
ATGCAATGGAAGAGCGTCGATTTTGAAAACAGGATTATCACCATCGACGCCAGTGTGATGAAGGGACGCAAAATTCATGT
GGTTCCTATGTCAGACCAGGTGGTTGAACTTCTTACTACGCTAAGCTCAATCACCAAACCAGTCTCAGAGTTTGTTTTTG
CCGGGCGCAACGATAAGAAGAAACCAATCTGCGATAACGCGGTATTGCTTGTGATCAAACAAATCGGCTATGAGGGGCTG
GAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCCGACGCCATTGAAGTGCA
ACTGGCACATGCCAACGGCGGATCTGTACGTGGAATTTACAACCATGCTCAGTATCTCGATAAGCGCAGAGAAATGATGC
AGTGGTGGGCGGATTGGCTTGATGAGAAGGTAGAGTGA

Protein sequence :
MLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDP
VKAKKASSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKA
RRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRS
MQWKSVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICDNAVLLVIKQIGYEGL
ESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWWADWLDEKVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-86 49
int ACU09430.1 integrase Not tested LEE Protein 2e-86 49
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 2e-86 49
ECs4534 NP_312561.1 integrase Not tested LEE Protein 2e-86 49
int CAC39282.1 integrase Not tested LPA Protein 3e-86 49
aec33 AAW51716.1 Int Not tested AGI-3 Protein 3e-86 49
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 2e-85 49
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 2e-85 49
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 2e-85 49
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 2e-81 48
int AAD44730.1 Int Not tested SHI-2 Protein 6e-85 48
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 6e-78 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_2735 YP_006144782.1 CPS-53 (KpLE1) prophage prophage CPS-53 integrase VFG0783 Protein 9e-87 49
CE10_2735 YP_006144782.1 CPS-53 (KpLE1) prophage prophage CPS-53 integrase VFG0598 Protein 1e-85 49