Gene Information

Name : CE10_2628 (CE10_2628)
Accession : YP_006144677.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Unknown
Product : putative transposase B, IS3411
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2670244 - 2671101 bp
Length : 858 bp
Strand : +
Note : -

DNA sequence :
ATGATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGCTATGCAGCGAACTGCATATTGCCCCGTCAAC
GTATTACCACTGTCAGCAACAGCGACATCATCCGGATAAACGCAGTGCCCGTGCGCAGCGCGATGACTGGCTGAAGAAAG
AGATACAGCGCGTATACGATGAAAATCACAAGGTATACGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACGGGAAGGTATC
AGAGTGGCCAGATGCACTGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTAC
GACCATCAGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAAACCGTCAGTTTGTGGCAGAACGTCCTGACCAGTTGTGGG
TGGCTGATTTTACTTACGTCAGCACATGGCAGGGGGTCGTCTATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATC
GTGGGGTGGCGGGTCTCATCGTCCATGGAAACGACATTCGTGCTGGATGCTCTGGAGCAGGCGTTATGGGCCCGTCGACC
GTCCGGCACAGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCCGGAT
TACTGGCATCAACAGGAAGTACTGGTGACTCGTATGACAACGCGATGGCGGAGAGCATCAATGGCCTTTACAAAGCGGAG
GTAATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCG
ACGATTGCTGGAAAGGCTGGGCCATACTCCTCCGGCAGAAGTAATGCCGATCAGTTAA

Protein sequence :
MMPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVRKVWRQLLREGI
RVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGVVYVAFIIDVFAGYI
VGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAE
VIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEVMPIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 8e-101 99
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 3e-129 99
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 4e-101 99
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-128 98
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-127 98
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 4e-124 97
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 2e-124 97
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 2e-124 97
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 2e-124 97
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-127 97
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-127 97
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 4e-86 97
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 1e-122 96
Z1638 NP_287141.1 transposase Not tested TAI Protein 5e-124 95
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 2e-124 95
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-124 95
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 3e-126 95
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 2e-126 95
Z1198 NP_286733.1 transposase Not tested TAI Protein 5e-124 95
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-122 94
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 7e-51 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_2628 YP_006144677.1 putative transposase B, IS3411 VFG1602 Protein 9e-123 94