Gene Information

Name : CE10_1838 (CE10_1838)
Accession : YP_006143914.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Unknown
Product : IS600 ORF1 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1858907 - 1859209 bp
Length : 303 bp
Strand : -
Note : -

DNA sequence :
ATGAGCAGAAAAAACCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGAT
CAGCGAAGGCGCTTCCCGATTATCTCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAG
CGAGATATATTAAAAAAAGCAACAGCGTATTTTGCACAGGAGTCGCTGAAAAATACGCGTTAA

Protein sequence :
MSRKNQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLE
RDILKKATAYFAQESLKNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 6e-40 100
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 9e-40 100
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 9e-40 99
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 9e-40 99
unnamed AAF09021.1 unknown Not tested SHI-O Protein 3e-39 98
unnamed AAF09029.1 unknown Not tested SHI-O Protein 3e-39 98
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 1e-33 97
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 1e-33 97
EXB21 ABD94708.1 putative transposase Not tested ExoU island B Protein 1e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CE10_1838 YP_006143914.1 IS600 ORF1 protein VFG1707 Protein 3e-40 100