Gene Information

Name : sitB (CE10_1318)
Accession : YP_006143418.1
Strain : Escherichia coli CE10
Genome accession: NC_017646
Putative virulence/resistance : Virulence
Product : iron transport protein, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1337839 - 1338666 bp
Length : 828 bp
Strand : -
Note : -

DNA sequence : 
ATGATGCAATCTGCAGGCATTGTCGTTAATGATGTTACTGTCACCTGGCGTAACGGGCACACAGCACTGCGCGATGCATC
CTTCACAGTACCAAGTGGATCTATTGCCGCTCTGGTTGGGGTAAACGGTTCCGGAAAATCGACGTTGTTTAAAGCGATTA
TGGGATTTGTGCGTCTGACCAGCGGAAAGATATCTGTTCTGGGTATTCCCACGCGACAGGCGTTACAGAAAAACCTGGTT
GCCTACGTCCCTCAGTCAGAAGATGTTGACTGGTCATTTCCTGTACTGGTGGAAGATGTGGTGATGATGGGCCGCTATGG
GCATATGGGTATGTTGCGTATCGCCAAAAAGAGGGATCGTCAAATTGTCACCGATGCGCTGGAACGTGTCGATATGGTGA
ATTTTCGCCATCGACAAATCGGCGAGCTTTCCGGTGGACAAAAGAAACGCGTCTTTCTGGCGAGAGCGATTGCACAGCAG
GGTGATGTGATCCTGCTGGATGAACCTTTTACTGGCGTTGATGTGAAAACCGAAGCCAAAATCATCAGCCTGTTGAGGGA
GTTACGCGCGGAAGGCAAAACGATGCTTGTCTCAACACACAATCTCGGATCCGTCACGACATTTTGCGATTATACGGTCA
TGGTCAAAGGCACCGTCCTGGCAAGCGGGCCGACAGACACCACTTTTACAGCCGAGAACCTAGAGCTGGCTTTTAGCGGC
GTACTGCGCCATGTCACACTTAACGGCTCGGAAGAAAGCATTATTACTGACGATGAACGCCCTTTTGTGGCTCATCGACC
GTCAGCGGTGCAGAGGGAAGAAAGATGA

Protein sequence : 
MMQSAGIVVNDVTVTWRNGHTALRDASFTVPSGSIAALVGVNGSGKSTLFKAIMGFVRLTSGKISVLGIPTRQALQKNLV
AYVPQSEDVDWSFPVLVEDVVMMGRYGHMGMLRIAKKRDRQIVTDALERVDMVNFRHRQIGELSGGQKKRVFLARAIAQQ
GDVILLDEPFTGVDVKTEAKIISLLRELRAEGKTMLVSTHNLGSVTTFCDYTVMVKGTVLASGPTDTTFTAENLELAFSG
VLRHVTLNGSEESIITDDERPFVAHRPSAVQREER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-100 77
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-100 77
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-100 77
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-101 77
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-101 77

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_006143418.1 iron transport protein, ATP-binding protein BAC0350 Protein 6e-101 77
sitB YP_006143418.1 iron transport protein, ATP-binding protein BAC0440 Protein 7e-81 62
sitB YP_006143418.1 iron transport protein, ATP-binding protein BAC0400 Protein 2e-45 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_006143418.1 iron transport protein, ATP-binding protein VFG0526 Protein 6e-101 77