Gene Information

Name : tnpR (pUMNK88_127)
Accession : YP_006142096.1
Strain :
Genome accession: NC_017645
Putative virulence/resistance : Virulence
Product : recombinase protein TnpR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 112438 - 112917 bp
Length : 480 bp
Strand : -
Note : resolvase domain-containing protein

DNA sequence :
GTGGCGCGGGTGTTCACCGACAAGGCTTCTGGCAAGGACACCCAGCGTCCCGAGCTGGAAAGGCTGCTGGCCTTCGTCCG
CGAGGGCGACACCGTGGTGGTGCATAGCATGGACAGGCTGGCACGCAACCTTGATGACCTGCGCCGCATCGTCCAAGGGC
TGACACAACGGGGCGTGCGCATGGAGTTCGTCAAAGAAGGGCTGAAGTTCACCGGCGAGGACTCACCGATGGCCAATCTG
ATGCTGTCGGTCATGGGAGCCTTCGCTGAGTTCGAGCGCGCCCTGATCCGCGAACGTCAGCGCGAGGGAATCGTGCTGGC
CAAGCAGCGCGGTGCCTACCGGGGACGAAAGAAATCGCTGAACAGCGAACAAATTGCCGAGTTGAAACGGCGAGTTGCGG
CAGGCGACCAAAAAACCTTGGTGGCCCGTGACTTCGGCATCAGCCGCGAAACCTTGTACCAGTACCTGCGGGAAGACTGA

Protein sequence :
MARVFTDKASGKDTQRPELERLLAFVREGDTVVVHSMDRLARNLDDLRRIVQGLTQRGVRMEFVKEGLKFTGEDSPMANL
MLSVMGAFAEFERALIRERQREGIVLAKQRGAYRGRKKSLNSEQIAELKRRVAAGDQKTLVARDFGISRETLYQYLRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 8e-62 99
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 4e-52 83
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 3e-52 83
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 3e-52 83
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 2e-52 82
res YP_005124341.1 DNA-invertase Not tested Not named Protein 7e-18 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpR YP_006142096.1 recombinase protein TnpR VFG1030 Protein 1e-52 83