Gene Information

Name : tnpA (pUMNK88_126)
Accession : YP_006142095.1
Strain :
Genome accession: NC_017645
Putative virulence/resistance : Unknown
Product : transposase protein TnpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 109463 - 112435 bp
Length : 2973 bp
Strand : -
Note : transposase Tn3 family protein

DNA sequence :
ATGCCACGCCGCTCAATCCTGTCCGCCACCGAGCGCGAAAGCCTGCTGGCACTGCCAGATGCCAAAGACGAACTGATACG
GCACTACACGTTCAACGAAACCGACCTGTCGGTGATCCGTCAGCGTCGCGGCGCCGCGAATCGATTGGGCTTCGCTGTGC
AGCTTTGCTACTTGCGATTCCCTGGCACCTTTTTGGGCGTCGATGAGCCTCCGTTTCCGCCCCTGTTGCGCATGGTGGCC
GCGCAACTCAAGATGCCAGTGGAAAGTTGGAGCGAGTACGGCCAGCGCGAACAGACACGGCGGGAGCACTTGGTCGAGCT
GCAAACGGTTTTTGGGTTCAAGCCCTTCACCATGAGCCACTATCGGCAAGCCGTGCATACATTGACCGAGCTGGCCTTGC
AGACCGACAAAGGCATCGTGCTGGCGAGCGCACTTGTCGAGAATCTGCGGCGGCAGAGCATTATCCTGCCCGCCATGAAT
GCCATCGAGCGCGCAAGCGCCGAGGCCATCACCCGTGCCAACCGACGCATTTACGCGGCGCTGACCGATTCTTTGTTATC
ACCCCACCGTCAGCGCCTGGACGAACTTCTCAAGCGCAAGGACGGCAGTAAAGTGACGTGGCTGGCATGGCTGCGCCAGT
CGCCTGCCAAACCGAACTCTCGCCACATGCTCGAACATATTGAGCGCCTGAAATCCTGGCAAGCACTTGATCTGCCCGCA
GGCATCGAGCGGCAGGTTCACCAGAACCGCCTGCTCAAAATCGCTCGTGAAGGTGGCCAGATGACGCCTGCTGATCTGGC
AAAGTTCGAGGTGCAACGACGCTATGCCACGCTGGTAGCGCTGGCCATCGAAGGCATGGCCACCGTCACCGATGAAATCA
TCGACCTTCACGATCGCATCATCGGCAAGCTGTTCAACGCGGCCAAGAACAAGCATCAGCAGCAGTTCCAGGCTTCCGGC
AAGGCGATCAACGACAAGGTGCGGATGTATGGGCGCATCGGTCAAGCGTTGATTGAGGCCAAGCAAAGCGGCAGCGATCC
GTTCGCCGCCATCGAGGCCGTTATGCCCTGGGACACCTTCGCCGCCAGCGTCACCGAAGCGCAAACATTGGCGCGGCCTG
CCGACTTTGATTTCCTGCACCACATCGGTGAAAGCTATGCCACGCTACGCCGCTACGCGCCGCAGTTCCTGGGCGTGCTC
AAATTGCGGGCTGCGCCCGCCGCCAAGGGTGTGCTCGATGCCATCGACATGCTGCGCGGCATGAACAGCGACAGCGCGCG
CAAGGTGCCCGCCGATGCGCCAACCGCATTCATCAAGCCGCGCTGGGCAAAGCTGGTTCTGACCGACGACGGCATCGACC
GGCGTTACTACGAGTTATGCGCCCTGTCGGAGCTGAAGAACGCGCTGCGCTCCGGTGATGTCTGGGTGCAGGGTTCTCGC
CAGTTCAAGGACTTCGACGAATACCTGGTGCCGGTCGAGAAGTTCGCCACTTTGAAGCTGGCCAGCGAATTGCCGCTGGC
AGTGGCCACCGACTGCGACCAATACCTGCATGACCGGTTGGAATTGTTGGAGGCGCAACTCGCCACAGTCAACCGCATGG
CTGCGGCCAACGACTTACCGGATGCCATCATCACCACCGCGTCAGGCCTGAAGATCACGCCGCTGGACGCGGCAGTACCA
GACGCCGCGCAAGCCATGATCGACCAGACAGCTATGCTGCTGCCGCACCTCAAAATCACCGAGTTGCTGATGGAGGTCGA
TGAATGGACGGGCTTCACCCGCCACTTCACACACCTGAAGACCAGCGACACGGCCAAGGACAAAACCTTGCTGTTGACGA
CGATCCTGGCCGACGCGATCAACCTGGGTCTGACCAAAATGGCCGAGTCCTGCCCTGGCACCACCTACGCCAAGCTGTCT
TGGCTGCAAGCCTGGCACATCCGCGATGAAACCTATTCGACGGCGCTGGCCGAGCTGGTGAATGCGCAGTTTCGGCAACC
CTTCGCCGGCAACTGGGGTGACGGCACCACGTCATCGTCGGACGGCCAGAACTTCAGAACCGGCAGCAAAGCAGAAAGCA
CTGGTCATATCAACCCGAAGTATGGAAGCAGTCCAGGACGGACTTTCTACACCCATATCTCCGACCAGTACGCGCCCTTC
AGTGCCAAGGTGGTCAACGTGGGCATTCGTGATTCAACTTACGTGCTTGATGGCCTGCTGTACCACGAGTCGGACTTGCG
CATCGAGGAACACTACACCGACACGGCAGGCTTCACCGATCACGTGTTTGGCTTGATGCATTTGCTGGGATTTCGCTTCG
CGCCGCGTATCCGTGACTTGGGCGAAACCAAGCTATTCATCCCCAAGGGCGATGCCGCCTATGACGCGCTCAAGCCGATG
ATTAGCAGCGACAGGCTGAACATCAAGCAAATACGCGCCCATTGGGATGAAATTCTGCGGCTGGCCACCTCCATCAAGCA
AGGCACGGTAACGGCTTCGCTGATGCTGCGCAAACTCGGCAGCTACCCGCGCCAGAACGGCTTGGCCGTGGCGTTGCGCG
AGCTGGGGCGCATCGAGCGCACGCTGTTCATTTTGGATTGGCTGCAAAGCGTGGAGCTGCGCCGCCGCGTCCATGCGGGG
CTGAATAAGGGCGAGGCGCGCAACGCGCTGGCCAGGGCGGTCTTCTTCTACCGATTGGGTGAAATCCGCGACCGCAGTTT
TGAGCAGCAGCGCTACCGGGCCAGCGGCCTCAATCTGGTGACGGCGGCCATCGTGTTGTGGAACACGGTATATCTGGAGC
GTGCCACCAGTGCTTTGCGTGGCAACGGCACGGCGCTGGACGACACATTGTTGCAATATCTGTCGCCGCTGGGGTGGGAG
CACATCAACCTGACCGGCGATTACCTATGGCGCAGCAGCGCCAAGGTCGGTGCGGGGAAGTTTAGGCCATTGCGACCGCT
GCCACCGGCTTAG

Protein sequence :
MPRRSILSATERESLLALPDAKDELIRHYTFNETDLSVIRQRRGAANRLGFAVQLCYLRFPGTFLGVDEPPFPPLLRMVA
AQLKMPVESWSEYGQREQTRREHLVELQTVFGFKPFTMSHYRQAVHTLTELALQTDKGIVLASALVENLRRQSIILPAMN
AIERASAEAITRANRRIYAALTDSLLSPHRQRLDELLKRKDGSKVTWLAWLRQSPAKPNSRHMLEHIERLKSWQALDLPA
GIERQVHQNRLLKIAREGGQMTPADLAKFEVQRRYATLVALAIEGMATVTDEIIDLHDRIIGKLFNAAKNKHQQQFQASG
KAINDKVRMYGRIGQALIEAKQSGSDPFAAIEAVMPWDTFAASVTEAQTLARPADFDFLHHIGESYATLRRYAPQFLGVL
KLRAAPAAKGVLDAIDMLRGMNSDSARKVPADAPTAFIKPRWAKLVLTDDGIDRRYYELCALSELKNALRSGDVWVQGSR
QFKDFDEYLVPVEKFATLKLASELPLAVATDCDQYLHDRLELLEAQLATVNRMAAANDLPDAIITTASGLKITPLDAAVP
DAAQAMIDQTAMLLPHLKITELLMEVDEWTGFTRHFTHLKTSDTAKDKTLLLTTILADAINLGLTKMAESCPGTTYAKLS
WLQAWHIRDETYSTALAELVNAQFRQPFAGNWGDGTTSSSDGQNFRTGSKAESTGHINPKYGSSPGRTFYTHISDQYAPF
SAKVVNVGIRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFGLMHLLGFRFAPRIRDLGETKLFIPKGDAAYDALKPM
ISSDRLNIKQIRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAG
LNKGEARNALARAVFFYRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERATSALRGNGTALDDTLLQYLSPLGWE
HINLTGDYLWRSSAKVGAGKFRPLRPLPPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA ACF06153.1 transposase Not tested Tn5036-like Protein 0.0 100
EC042_4089 YP_006098372.1 transposase Not tested Tn2411 Protein 0.0 89
tnpA AAL08440.1 transposase TnpA Not tested SRL Protein 0.0 87
EXA24 ABD94633.1 truncated Tn1721 tranposase Not tested ExoU island A Protein 0.0 73
tnpA ACY75538.1 TnpA Not tested Tn6060 Protein 0.0 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpA YP_006142095.1 transposase protein TnpA VFG1031 Protein 0.0 87