Gene Information

Name : ECNA114_4679 (ECNA114_4679)
Accession : YP_006141802.1
Strain : Escherichia coli NA114
Genome accession: NC_017644
Putative virulence/resistance : Unknown
Product : Putative integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4826566 - 4827744 bp
Length : 1179 bp
Strand : -
Note : -

DNA sequence :
ATGCCACTTACTGTTCGACAAATTGAGTCAGCTAAACCCGCTGACAAGGATTACAAACTTTCCGACGGTCAGGGACTTTA
TCTTCTTGTCAAAAAATCCGGTTCCCGTTACTGGAATCTGAAGTACCGTTTTGCCGGTAAGGAAAAGAAACTGGTGATTG
GTGTCTATCCTGACATATCTCTGGCTCAGGCGCGTCAGAAACGGGATGAAGCGCGTAAACTCCTGGCTGAAGGAAAGGAC
CCGTCATATGAGAAACAGGCGCTAAAATTTGCCATCAGGGAGAGTATGGCCTGCACATTCCGCACCATTGCAGAGGAACT
GCTTACCCATATGGCACGTCGATGGACAGCAGGTTACCAGGCAGACCAGCGTGCAAGACTTGAAAATCATGTTTTCCCTG
CCCTTGGAAACCGTCCTGTGACCGGGATACGTCCCATGGAAATACTGAACGTCCTGAGGGTGATTGAAGAACAGGGAAAA
CTTGAAGCACTGCGTAAAACACGCCAGCTCTGTGCGCAGGTTTTTGATTATGCCATAGCAACAGGACGTGCAACTGTTAA
CCCAGCGTCAACACTCAGCGGGGTACTGCTTCCTCCTGAAAAACAACAGCGCAGGACACTTTCTGAAGAGCAGATGGGGG
CTTTCATGCATCAGATGACGGCTTCCGGAAATCTGATGTCACTGGCAACGCGAATGCTGGTTCTTACAGCGGTTCGCACC
GGAGAACTGCGGCTGGCGAGCTGGGATGAAATAAACTTCACGGAGGCCCTGTGGGTTATTCCAAAAGAAAGAATGAAAAT
GCGACGACCGCATGTTGTGCCGCTTTCACGTCAGGTACTGGCGTTACTGAAGGAGATAAAAACACGCACTGAATCGCGTC
ATTCCGCCTTTATTATTCCCGGGGCATTCAGGAAAGACCGCCCCCGGGGCCGTAAGTGTATTAATGAATTCCTTGAGCAG
TCAGGCTGGCATGCCCTGACAACAGCTCACGGTTTTCGGCATACCTTCAGTACCATTCTTCATGACCATGATTTCAGCTC
GGCCTGGATTGAACTCCAGCTTGCCCACGTTGATAAAAACGTCATGCGTGGCACCTATAACCACGCGCAGTATCTCGATG
GTCGCCGTGAAATGATGCAGTGGTACGCCGACTACATTGATTCACTCTCCAGCCAGTAA

Protein sequence :
MPLTVRQIESAKPADKDYKLSDGQGLYLLVKKSGSRYWNLKYRFAGKEKKLVIGVYPDISLAQARQKRDEARKLLAEGKD
PSYEKQALKFAIRESMACTFRTIAEELLTHMARRWTAGYQADQRARLENHVFPALGNRPVTGIRPMEILNVLRVIEEQGK
LEALRKTRQLCAQVFDYAIATGRATVNPASTLSGVLLPPEKQQRRTLSEEQMGAFMHQMTASGNLMSLATRMLVLTAVRT
GELRLASWDEINFTEALWVIPKERMKMRRPHVVPLSRQVLALLKEIKTRTESRHSAFIIPGAFRKDRPRGRKCINEFLEQ
SGWHALTTAHGFRHTFSTILHDHDFSSAWIELQLAHVDKNVMRGTYNHAQYLDGRREMMQWYADYIDSLSSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 6e-103 54
int AAD44730.1 Int Not tested SHI-2 Protein 2e-97 52
int CAC39282.1 integrase Not tested LPA Protein 8e-99 52
aec33 AAW51716.1 Int Not tested AGI-3 Protein 6e-99 52
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 5e-97 52
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 6e-97 52
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 6e-97 52
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 5e-98 51
ECs4534 NP_312561.1 integrase Not tested LEE Protein 5e-98 51
int AAC31482.1 CP4-like integrase Not tested LEE Protein 4e-98 51
int ACU09430.1 integrase Not tested LEE Protein 4e-98 51
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 4e-94 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECNA114_4679 YP_006141802.1 Putative integrase VFG0598 Protein 3e-97 52
ECNA114_4679 YP_006141802.1 Putative integrase VFG0783 Protein 2e-98 51