Gene Information

Name : ECNA114_4677 (ECNA114_4677)
Accession : YP_006141800.1
Strain : Escherichia coli NA114
Genome accession: NC_017644
Putative virulence/resistance : Virulence
Product : Putative ShiA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4825101 - 4826141 bp
Length : 1041 bp
Strand : -
Note : -

DNA sequence : 
ATGAATGACAGATTACGCTTTGAAGTGAACGATAACCAGGGGTGGTTCGTATTCCCGGACGCCTGGTTCGGCCCGTTGCT
GGATGAGTTTGACGAACTGCTTGATGCATACGACGCGGATGAAATCAGCGAAACAAGTTATATCAACAAACTCAGGCGTC
TTTCCCGACAGGAGCCTGACTTTATTGATGTCCACGCTCACCTGGCATACGTATTTCTGGAACAAAACTCTCCGCGTAAG
GCACTGAACGCTGCGCTTAAAGGAATGGTGGTTGCTAATCGCCTTATACCTGAAAGTTTCAGCGGTGAAATCATCTGGAT
GAATCCGCAAAACCGGCCTTATCTGCGCGCCCTTTATGCAACAATTCTCGCAAATGTGCACTTACAGCGTCACCGGCATG
CTGTCATGCTCATTGAAAAAATACTGGCGTACAACCCCGAAGATAATCAGGGAGCACGCTGGTTGCTGGGGTCGGAACTG
TTACGTGCTGGCGACCATGAGCGCGCACTCCGTGTACTGAAATCGCATACCGGTGAATTCTCACCCTGCTGGTATGAACT
CGGCCTTCTGCATTTTCTGAACGGGGAACATGTTAAGGCTGCCACAGCTTTTCGCCATGGCTTTGTCACAAACACTTACA
TCGCGGAAATGCTGTGCGGAAACCGGCATCCATTTCCACTTGCTGTGTGGCATAACTTTTCATGCGGTCCGGATACTGCT
GAAGATTATTATGTAACATACTCCCCATTATGGGGAGAATACCCGGAAGCACTGCTGTTTGTAAACTGGCTCTGTAACCA
TTCCGCTGTGCTGCATGAACGGGCAGAAATCATGAAATGCGCCGAAATGCTGATGCAGGAAGATGATGTCGAAATATGCG
AGAGGATTTTAAGACAGCAGGAAAAGTTGCTGGAAAGAATCGACGAACGGAGTTCTGAAGAGATTGTACAGAAATGCAGA
ACATGGCGGGGAGAAGAAGTCTGGCCCTGGATATTGCCATTTACAGCCGGGGGAATAAATCCCTGTATCCGGTATCAGTA
A

Protein sequence : 
MNDRLRFEVNDNQGWFVFPDAWFGPLLDEFDELLDAYDADEISETSYINKLRRLSRQEPDFIDVHAHLAYVFLEQNSPRK
ALNAALKGMVVANRLIPESFSGEIIWMNPQNRPYLRALYATILANVHLQRHRHAVMLIEKILAYNPEDNQGARWLLGSEL
LRAGDHERALRVLKSHTGEFSPCWYELGLLHFLNGEHVKAATAFRHGFVTNTYIAEMLCGNRHPFPLAVWHNFSCGPDTA
EDYYVTYSPLWGEYPEALLFVNWLCNHSAVLHERAEIMKCAEMLMQEDDVEICERILRQQEKLLERIDERSSEEIVQKCR
TWRGEEVWPWILPFTAGGINPCIRYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec34 AAW51717.1 Aec34 Not tested AGI-3 Protein 9e-135 82
shiA AFX83956.1 ShiA family protein Not tested SE-PAI Protein 4e-134 82
shiA NP_709438.1 hypothetical protein Virulence SHI-2 Protein 3e-133 81
shiA AAD44731.1 ShiA Virulence SHI-2 Protein 2e-133 81
shiA NP_839237.1 hypothetical protein Virulence SHI-2 Protein 3e-133 81
c3557 NP_755432.1 ShiA-like protein Not tested PAI I CFT073 Protein 2e-131 79
ECUMN_3323 YP_002414005.1 SHI-2 pathogenicity island protein Virulence Not named Protein 2e-132 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECNA114_4677 YP_006141800.1 Putative ShiA VFG0599 Protein 1e-133 81
ECNA114_4677 YP_006141800.1 Putative ShiA VFG1694 Protein 8e-132 79