Gene Information

Name : papE (ECNA114_4665)
Accession : YP_006141788.1
Strain : Escherichia coli NA114
Genome accession: NC_017644
Putative virulence/resistance : Virulence
Product : Minor pilin subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4816164 - 4816688 bp
Length : 525 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAGATAAGAGGTTTGTGTCTTCCGGTAATGCTGGGGGCAGTGTTAATGTCTCAGCATGTACATGCAGCTGATAA
TCTGACCTTTAAAGGAAAACTGATTATTCCTGCCTGTACTGTAACAAAGGCAGAGGTTGACTGGGGAAATGTAGAGATTC
AGACATTGAGCCCAGATGGAAGCGGACATCAAAAAGACTTTTCTGTCGGTATGAACTGCCCCTATAGCCTGGGAACCATG
AAAGTCACAATAACATCAAATGGTCAGACTGGTAATTCGATACTGGTGCCTGATACTTCAAGCGTTTCTGGTGATGGGTT
GCTCATTTATCTTTACAACAGTAATAACAGTAGTATTGGTAACGCAGTCACTTTAGGAAGTCAGTTTACGCCCGGAAAAA
TCACGGGAGTAGGGCAGTCTAAAAATATTACTCTTTACGCAAAACTTGGATATAAAGGGGATATGAGAAAGCTGCAGGCT
AAAGCATTTTCTGCAACGGCAACGCTGGTTGCATCATATTCGTAA

Protein sequence : 
MKKIRGLCLPVMLGAVLMSQHVHAADNLTFKGKLIIPACTVTKAEVDWGNVEIQTLSPDGSGHQKDFSVGMNCPYSLGTM
KVTITSNGQTGNSILVPDTSSVSGDGLLIYLYNSNNSSIGNAVTLGSQFTPGKITGVGQSKNITLYAKLGYKGDMRKLQA
KAFSATATLVASYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfE CAD42025.1 PrfE protein Virulence PAI II 536 Protein 1e-67 84
papE NP_755460.1 PapE protein Virulence PAI I CFT073 Protein 3e-61 75
papE_2 NP_757029.1 PapE protein Virulence PAI II CFT073 Protein 3e-61 75
papE YP_854250.1 PapE protein Virulence PAI I APEC-O1 Protein 6e-60 71
papE AAZ04420.1 P pilus tip protein Virulence PAI I APEC-O1 Protein 4e-60 71
prsE YP_002414011.1 Fimbrial protein Not tested Not named Protein 2e-54 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papE YP_006141788.1 Minor pilin subunit VFG1544 Protein 4e-68 84
papE YP_006141788.1 Minor pilin subunit VFG0899 Protein 7e-62 75
papE YP_006141788.1 Minor pilin subunit VFG0888 Protein 7e-62 75