Gene Information

Name : papH (ECNA114_4660)
Accession : YP_006141783.1
Strain : Escherichia coli NA114
Genome accession: NC_017644
Putative virulence/resistance : Virulence
Product : minor pilin subunit PapH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4811012 - 4811599 bp
Length : 588 bp
Strand : +
Note : -

DNA sequence :
ATGAGACTGCGATTCTCTGTTCCACTTTTCTTTTTTTGCTGTGTGTTTGTTCATGGTGTTTTTGCCGGTCCGTTTCCTCC
GCCCGGCATGTCCCTTCCTGAATACTGGGGAGAAGAACACGTATGGTGGGACGGCAGGGCTGCTTTTCATGGTGAGGTTG
TCAGCCCTGCCTGTACTCTGGCGATGGAAGACGCCTGGCAGATTATCGATATGGGGGAAACCCCGGTTCGGGATTTACAG
AATGGTTTCTCCGGACCTGAAAGAAAATTCAGCCTCCGGCTCAGGAACTGTGAATTTAACAGTCAGGGTGGGAACCTTTT
CTCTGATTCCCGGATAAGGGTGACTTTCGATGGCGTCCGGGGTGAAACGCCGGATAAGTTTAATTTATCCGGTCAGGCAA
AAGGAATTAATCTGCAGATAGCTGATGCCAGGGGAAATATTGCCCGGGCAGGGAAAGTAATGCCTGCAATACCATTGACG
GGTAATGAAGAAGCGCTGGATTACACCCTCAGAATTGTGCGAAACGGAAAAAAACTTGAAGCCGGAAATTATTTTGCCGT
GCTGGGATTCCGGGTCGATTATGAGTGA

Protein sequence :
MRLRFSVPLFFFCCVFVHGVFAGPFPPPGMSLPEYWGEEHVWWDGRAAFHGEVVSPACTLAMEDAWQIIDMGETPVRDLQ
NGFSGPERKFSLRLRNCEFNSQGGNLFSDSRIRVTFDGVRGETPDKFNLSGQAKGINLQIADARGNIARAGKVMPAIPLT
GNEEALDYTLRIVRNGKKLEAGNYFAVLGFRVDYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papH NP_755466.1 PapH protein Virulence PAI I CFT073 Protein 4e-82 99
papH_2 NP_757035.1 PapH protein Virulence PAI II CFT073 Protein 4e-82 99
papH AAL67416.1 PapH Virulence PAI II CFT073 Protein 3e-82 99
papH YP_002414016.1 minor pilin protein PapH Not tested Not named Protein 1e-81 99
papH AAZ04425.1 fimbrial regulatory protein Virulence PAI I APEC-O1 Protein 1e-77 97
papH YP_854255.1 minor pilin subunit PapH Virulence PAI I APEC-O1 Protein 2e-77 97
prfH CAD42030.1 PrfH protein Virulence PAI II 536 Protein 3e-79 95
pixH CAE85160.1 PixH protein Not tested PAI V 536 Protein 1e-58 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papH YP_006141783.1 minor pilin subunit PapH VFG0883 Protein 1e-82 99
papH YP_006141783.1 minor pilin subunit PapH VFG0894 Protein 1e-82 99
papH YP_006141783.1 minor pilin subunit PapH VFG1549 Protein 1e-79 95