Gene Information

Name : papA (ECNA114_4659)
Accession : YP_006141782.1
Strain : Escherichia coli NA114
Genome accession: NC_017644
Putative virulence/resistance : Virulence
Product : PapA protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4810352 - 4810948 bp
Length : 597 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAGAGGTTGTTATTTATGATTAAGTCGGTTATTGCCGGTGCGGTAGCTATGGCAGTGGTGTCTTTTGGTGCAAA
TGCTGCTGATACCGTTGCGCCATCTCAGGGGTCAGGGCAGGTGAACTTTAAAGGGACTGTTATTGATGCCCCGTGTGGCA
TTGAAACGCAGTCAGCAAATCAGACTATTGATTTTGGCCAGATTTCGAAATTGTTTCTGGAGAATGGTGGAACCACCCAG
CCGAAAGATCTTGATATTAAGCTTGTGAATTGCGATATCACCAATTTTAAAAAGGCAGCTACACCAGGCGGTGCAGCTAA
GACAGGTACGGTATCCCTGACTTTTGCAGGTGTGCCTGCAGGAAACGCAAGTGACATGCTGAAGACCGTTGGTGAAACCA
ATACTGCTATTGTGGTTCTTAATCCACATGGCTCGCGTGTGAAGTTTGACGGTAAAACGTCAACGGGGCCTTCTAATCTG
GTTGATGGTAATAATACTCTCCACTTTACAACCTATGTAATGAAAGATGATAGTGGCAACTCTGTAAAAGAAGGTGCCTT
CTCAGCAGTTGCAAATTTCAACCTGACTTATCAGTAA

Protein sequence : 
MKKRLLFMIKSVIAGAVAMAVVSFGANAADTVAPSQGSGQVNFKGTVIDAPCGIETQSANQTIDFGQISKLFLENGGTTQ
PKDLDIKLVNCDITNFKKAATPGGAAKTGTVSLTFAGVPAGNASDMLKTVGETNTAIVVLNPHGSRVKFDGKTSTGPSNL
VDGNNTLHFTTYVMKDDSGNSVKEGAFSAVANFNLTYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papA AAC61718.1 PapA Virulence PAI I CFT073 Protein 5e-38 75
papA NP_755467.1 PapA protein Virulence PAI I CFT073 Protein 6e-60 75
papA AAL67417.1 PapA Virulence PAI II CFT073 Protein 2e-63 74
papA_2 NP_757036.1 PapA protein Virulence PAI II CFT073 Protein 6e-63 74
prfA CAD42031.1 PrfA protein Virulence PAI II 536 Protein 9e-57 73
papA YP_002414017.1 P-fimbriae major subunit Not tested Not named Protein 7e-51 67
papA YP_854256.1 major fibrial protein Virulence PAI I APEC-O1 Protein 2e-44 61
papA AAZ04426.1 major fibrial protein Virulence PAI I APEC-O1 Protein 1e-44 61
pixA CAE85161.1 PixA protein Not tested PAI V 536 Protein 1e-36 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papA YP_006141782.1 PapA protein VFG0882 Protein 2e-60 75
papA YP_006141782.1 PapA protein VFG0893 Protein 2e-63 74
papA YP_006141782.1 PapA protein VFG1550 Protein 4e-57 73