Gene Information

Name : tnpA1 (ECNA114_4505)
Accession : YP_006141628.1
Strain : Escherichia coli NA114
Genome accession: NC_017644
Putative virulence/resistance : Unknown
Product : IS-66 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4657465 - 4657890 bp
Length : 426 bp
Strand : +
Note : -

DNA sequence : 
ATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAACTATTCGAATGAATTCAAACTTCGTATGGTGGAACTGGCATC
ACAACCTGGAGCTTGTGTTGCACAGATTGCACGTGAAAATGGCGTCAATGATAATGTTATTTTCAAATGGCTCAGGCTCT
GGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAA
ATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCACTTCCACTCAGACCAGAGTCAGTGC
CAGTTCCTGCAAGGTGGAATTCCGTCACGGTAACATGACGCTGGAAAATCCATCGCCAGAGCTGCTCACAGTGTTGATCC
GTGAACTGACCGGGAGGGGAAGATGA

Protein sequence : 
MELQDWRKEPRKNYSNEFKLRMVELASQPGACVAQIARENGVNDNVIFKWLRLWQNEGRVSRRLPVTTSSDTGVELLPVE
ITPDEQKEPVAAIAPSLSTSTQTRVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3566 YP_003223429.1 hypothetical protein Not tested LEE Protein 1e-60 98
Z1208 NP_286743.1 hypothetical protein Not tested TAI Protein 2e-57 92
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 1e-56 91
unnamed CAD66197.1 hypothetical protein Not tested PAI III 536 Protein 2e-45 90
Z1159 NP_286694.1 hypothetical protein Not tested TAI Protein 6e-49 82
Z1598 NP_287102.1 hypothetical protein Not tested TAI Protein 6e-49 82
unnamed CAD66191.1 hypothetical protein Not tested PAI III 536 Protein 5e-46 76
ECUMN_3365 YP_002414038.1 putative transposase Not tested Not named Protein 2e-32 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpA1 YP_006141628.1 IS-66 transposase VFG1672 Protein 1e-45 90
tnpA1 YP_006141628.1 IS-66 transposase VFG1666 Protein 2e-46 76
tnpA1 YP_006141628.1 IS-66 transposase VFG1738 Protein 5e-33 56